Manihot esculenta (cassava): 110602949
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Entry
110602949 CDS
T05761
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic
KO
K02357
elongation factor Ts
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
mesc03012
]
110602949
03029 Mitochondrial biogenesis [BR:
mesc03029
]
110602949
Translation factors [BR:
mesc03012
]
Eukaryotic type
Elongation factors
110602949
Prokaryotic type
110602949
Mitochondrial biogenesis [BR:
mesc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
110602949
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
EF-Ts_N
S1_RRP5
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
110602949
NCBI-ProteinID:
XP_021596253
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All DBs
Position
16:31839666..31846948
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AA seq
1142 aa
AA seq
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MTTIVPSSMSTVSFIPGTAFTIKKNICLTKCSLSRKSSKHKLSSQRLVLPLLTSAGLFPQ
YRTDCTLLHRSILHTVSATGTDTDIVVEEPDSLVADEDSDGASEIPVDAVDLSEKSSIKS
DASTPPSQSRRSRPSRKSEMPPVKNVDLIPGATFTGKVRSIQPFGAFVDFGAFTDGLVHV
SRLSDNFVKDVGSIVSLGQEVKVRLVEVNTETGRISLTMRESDSTSKSQQRRDSPGTSSS
DKPRPARRNTPKPGQKKEVVKTSKFVKGQELNGTVKNLTRSGAFISLPEGEEGFLPQSEE
SEDGFLNIMGGSSLQVGQEVSVRVLRVARGQVTLTMKKEEENEFNLEFSQGVVHDATNPF
VLAFRKNKDIAAFLDEREKVEQAVKKPVKPKLSVEIGQVNQTEGIPEVQGQHSSSDERSV
DLSSMVVETVDDDDITTREVTAGSSRAGNDEEPGSVESRSSQSVGVFETVEEAEASPKEV
VIGSSSASNDEQPESIASTISQSVERVIETVEEAEATPNEDAVVSSNAGDDPELKGIESI
SSQSIDGALQIVEKEAEEAPSTDGVKDGTSDLSGEKVDQPGDAIAKDGVKIQTPTMQNEI
SSTEPVGNEGRARNPNENGSITGSESQAIEELVEGQVENTKIEVEIQTSVAEAEIPSVAP
IENVVETVPEITGTFGDSNGQSSSPSNEESVAKATMSPALVKQLREETGAGMMDCKKALS
ETGGDIVKAQEFLRKKGLASAEKKASRTTAEGRIGSYIHDSRIGVLVEVNCETDFVSRGD
IFKELVNDIAMQVAACPQVQYLGTEDVPEEIVNKEKEIEMQKEDLLLRPEQIRSKIVEGR
IRKRLEELALLEQPYIRNDKIVVKDWVKQTIATIGENIKVKRFIRYNLGEGLEKKSQDFA
AEVAAQTAAKPVASPAIEQPATAETKETIQKPPAVTVSAALVKQLREETGAGMMDCKKAL
SETGGDLEKAQEYLRKKGLSTADKKSSRLAAEGRIGSYIHDSRIGVLIEVNCETDFVGRS
EKFKEMVDDLAMQVVACPQVQFVSIEDVPESVVKKEKELEMQREDLLSKPENIREKIVEG
RISKRLGELALLEQPFIKNDSVLVKDLVKQTVAALGENMKVRRFVRFTLGESAEDTKTET
EA
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccattgttccaagttcgatgagcactgtttctttcattcctggaactgccttt
acaataaagaaaaatatttgcctcacaaaatgtagtttgtcaaggaaatcttcaaagcat
aagctatcctcacaaagactagtattacctcttctgacatctgctggattgttcccacaa
tacagaacggattgtacattgcttcatagatctatattgcatactgtatcagctacagga
actgatactgatattgtggtagaggagccagattcacttgttgcagatgaagactctgat
ggagcctcagaaattccagtagatgcagttgatttaagtgaaaaatcctccatcaagtca
gatgccagtactcctccatctcaatcaagacggtcaagacccagtaggaaaagtgaaatg
ccaccagtgaagaatgtggaccttattcctggcgcaacatttactgggaaagtaaggtca
atccaaccatttggtgcttttgtagattttggggccttcacagatggtctggtacatgtt
tccaggctaagtgataattttgttaaggatgttggaagtattgtatctcttggccaggag
gtgaaagtgagattagttgaagttaacactgagacagggcggatttctcttactatgcgt
gaaagtgacagtaccagcaagtctcaacaaagaagagattctcctggtacttccagcagt
gataagccaaggcctgctagaaggaacacaccaaagcctggccagaaaaaagaagttgtg
aagacatcgaagtttgttaaagggcaggaactgaatggcacagtgaagaatttgaccagg
tctggtgctttcatctctctccctgagggagaggaaggattcttgccacaatcagaagaa
tctgaagatggatttctaaacataatggggggctcatcactgcaggttggccaggaagtt
agtgttagggtattgcgtgtcgcgaggggacaggttaccttgacaatgaagaaagaagag
gagaatgagtttaatctggaatttagccaaggggttgtccatgatgcaacaaacccattt
gttctggccttccgtaagaacaaggatattgctgcatttttggatgagagggaaaaagtc
gaacaagcggtgaaaaaacctgtgaaaccaaagttgtcagtggaaataggacaagtaaac
cagactgaaggtataccagaagttcagggtcagcattcaagcagtgatgagagatcagtt
gatctctcttctatggtggttgaaacagtagatgatgatgacattactacaagagaagtc
actgctggatccagtagagctggcaatgatgaggagccaggaagcgtcgagtcaaggtca
tcacaaagtgttggagtgtttgaaactgtagaggaggctgaagcttctccaaaagaagtt
gtcattgggtccagcagtgctagtaatgatgaacaaccggaaagcatagcttcaaccata
tcacaaagtgttgaaagagttattgaaactgtagaggaagctgaagctactccaaatgaa
gatgctgtggtatccagtaatgctggagatgatccagagctgaaaggcatagaatctatc
tcatcacagagtatcgatggggcacttcagattgtagagaaagaagctgaggaggctcct
tcaactgatggggtcaaagatggaacatcagacttatctggagaaaaagttgatcagcct
ggtgatgccatagcaaaagatggggtgaaaatacaaactcctacaatgcagaatgaaatt
tcttctactgaaccagttggaaatgaaggcagagcaagaaaccctaatgaaaatggcagt
attactggctcagaaagtcaggctattgaggaactagtggagggccaagttgaaaacacc
aagattgaagtggagattcaaacgtctgttgctgaggctgaaattccttctgttgcacca
attgaaaatgtagtggaaactgtccccgaaataactggcacttttggagattcaaatggg
caaagcagcagtccttccaatgaggagagtgttgctaaagcaaccatgtcaccggcactg
gtgaagcagcttcgcgaagaaacaggagcaggaatgatggattgtaagaaagccctctca
gagactggaggggacatcgtcaaagctcaggagttcctcaggaagaaaggattagcaagt
gcagaaaagaaagccagcagaaccacagctgaaggaagaattggttcttacattcatgat
agcaggataggagtccttgtagaggtgaactgtgaaacagattttgtctccaggggtgac
attttcaaggagctggtaaatgacatagccatgcaggtggctgcatgcccacaagtacag
taccttggtactgaagatgttcctgaagagattgtgaacaaggaaaaagaaattgagatg
cagaaggaagatctcttattaagacctgagcagattagatcaaagattgtagaaggacga
atcaggaagagacttgaggagctggcgttgctggaacagccgtacattaggaatgataag
attgtggtgaaggactgggtgaaacagacaattgcaactattggagaaaatataaaggtc
aagaggtttattcgctacaaccttggtgaaggcttggagaagaaaagtcaggattttgct
gctgaggtggcagcacaaactgcagcaaaaccagttgcatcaccagcgatagagcagcct
gctacagcagaaaccaaggaaactattcagaagccaccagcagtaacagtttctgctgca
cttgttaaacaactgagggaagaaacaggagctggtatgatggactgcaagaaagcgctg
tccgaaactggaggagatcttgagaaggcacaggagtatctcagaaagaaaggtctttca
actgctgacaagaaatctagtcgacttgcagctgaaggcagaattggctcctacattcat
gattcccgcataggagtgctgattgaagtaaactgtgaaactgactttgtgggtagaagt
gaaaaattcaaggaaatggttgatgatctagccatgcaagttgtggcatgcccacaggtg
cagttcgtgtccattgaggatgtcccagagagcgtcgtgaaaaaggaaaaggagctcgag
atgcaaagagaagatcttttgtcgaagccagagaacataagagagaagattgttgagggc
agaatctcaaagagattaggagagcttgctcttctagagcaaccttttataaagaatgat
agtgttttggtgaaagatttggtgaagcagactgttgctgctcttggggagaacatgaaa
gtgcggaggtttgttcgatttactcttggggagagtgcagaagatacaaaaacagaaact
gaagcctga
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