KEGG   Manihot esculenta (cassava): 110602983
Entry
110602983         CDS       T05761                                 
Name
(RefSeq) DNA repair protein recA homolog 3, mitochondrial isoform X1
  KO
K03553  recombination protein RecA
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    110602983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mesc03400]
    110602983
DNA repair and recombination proteins [BR:mesc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     110602983
    RecFOR pathway proteins
     110602983
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    110602983
SSDB
Motif
Pfam: RecA_N RecA_C ATPase Rad51 MT3502_N ATPase_2 AAA_25 AAA_16 AAA_35 NPHP3_N AAA_22 nSTAND3 AAA_14 AAA_24 DUF7125 TK ABC_tran CobU AAA DnaB_C nSTAND_NTPase5 NB-ARC DEXQc_Suv3 RRM_R3HCC1L P-loop_TraG
Other DBs
NCBI-GeneID: 110602983
NCBI-ProteinID: XP_021596308
LinkDB
Position
16:30638913..30643315
AA seq 422 aa
MANLLRNASSLRRALLAPTVFKGGILGTSSWSCNFSSKGRKRSKSDGSDSSEANLSKKEV
ALQQALDQITCTYGKGSIMWFGRSIIPKDVPVVSTGSFALDIALGTGGLPKGRIVEIYGP
EASGKTTLALHVIAEAQKQGAYCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQALS
LVDTLIRSGSVDVVVVDSVSNVAALVPKSELDGEMGDAHMAMQARLMSQALRKLTHSLSL
SQTILIFINQVRSKLSTFGFGGPTEVTCGGNALKFYASLRLNVKRVGFIKKGEETIGSQV
QVKIVKNKLSPPFKTVQFELEFGKGICRESELIDLGLKHKFLVRAGSFYNYNGQSFRGKE
ALRQFLAENDVAREKLTMKLRQELLDFGSGKEQGTEATGGEPVEGIISADATDEEAVIAV
EA
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggccaaccttcttcgaaacgcttcttctctgagacgtgccctacttgctcccacggtt
ttcaagggaggaatattgggaacgtcttcttggagttgcaatttttcttctaaaggtaga
aaaagatccaagtctgatggaagtgactctagtgaagctaacttgtctaaaaaagaggtg
gctctgcaacaagccctggatcagattacttgcacatatggaaagggatctatcatgtgg
tttggccggtcaattattccaaaagacgttccagtggtgtccacaggaagttttgcactt
gacatagcacttggaactggtgggcttccaaaggggcgtattgtggagatttatggtcct
gaggcttctgggaaaactactcttgctctacatgtaattgctgaagcacagaagcaagga
gcttactgtgtttttgttgatgctgagcacgctcttgattcctcattggctaaggccatt
ggagtaaacactgaaaacttgcttctgtcacaacctgattgtggtgaacaagctctcagc
ctggtggatacacttataaggagtggttctgtggatgttgtggttgttgacagtgtaagt
aatgtagctgcccttgtgcctaaaagtgagcttgatggtgagatgggcgatgctcatatg
gcaatgcaagctagattgatgagccaggcgctacgcaagttgacccattctttatcgctg
tcacagacgattttgatcttcataaatcaagtgaggtcaaagcttagtacctttggattt
ggtgggccaactgaagtaacttgtggtggtaatgctttgaagttctatgcttcattgcgc
ttaaacgtaaaaagagtggggtttataaagaagggggaagagaccataggaagtcaagtt
caagtgaagatcgtaaagaataaactttctcccccatttaaaactgtccaatttgagctt
gagtttgggaagggaatatgccgggaatcagagctcatagatttggggttaaaacacaaa
ttccttgtcagggctggttcattttacaattacaatggtcagagtttccgtgggaaggaa
gcccttaggcagtttttagctgaaaatgatgttgcacgggaaaaacttactatgaagctc
aggcaggagctacttgattttggctcaggtaaggaacagggaacagaagctactggtgga
gaacctgtagaaggaattatttcagctgacgctactgatgaagaagcagttattgcagta
gaggcgtaa

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