Manihot esculenta (cassava): 110603076
Help
Entry
110603076 CDS
T05761
Name
(RefSeq) serine/threonine-protein kinase VPS15
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
110603076
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mesc01001
]
110603076
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110603076
Enzymes [BR:
mesc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
110603076
Protein kinases [BR:
mesc01001
]
Serine/threonine kinases: Other
VPS15 family
110603076
Membrane trafficking [BR:
mesc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
110603076
Autophagy
Autophagosome formation proteins
PI3K complex
110603076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
HEAT
NBCH_WD40
PK_Tyr_Ser-Thr
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
HEAT_EZ
Cohesin_HEAT
APH
Motif
Other DBs
NCBI-GeneID:
110603076
NCBI-ProteinID:
XP_021596438
LinkDB
All DBs
Position
16:31345368..31356136
Genome browser
AA seq
1543 aa
AA seq
DB search
MGNKIARTTQVSASEYYLHDLPSSYNLVLKEVLGRGRFFKSILCKHDEGLVLVKVYFKRG
DPINLREYERRLEQIKETFLALDHPHVWPFQFWQETDKAGYLLRQYFFNNLHDRLSTRPF
LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDD
PSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDAPLRPSMDIFAVGCVIAELFLEGQQ
LFELSQLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPEARLSAESYLQNYANVVFP
AYFSPFLHNFYCCWNPLHSDMRVAMCQSVFHEILKQMMSDKTGENIETASVNSMSGKLAL
DMVEKPNLDLTMDSVKNEKTEKGLVRDQYKLLGDISTLLGDVKQSNDYAGVNLGPESTPN
SAFSHDIKQCGMQSPGELLQAISNAFRKNDHPFLKKITMDDLNSLMSEYDSQSDTFGMPF
LPLPEDSMKCEGMVLIASLLCSCIRNVKLPHLRRGAILLLKSSSLYIDDEDRLQRVLPYI
IAMLSDPAAIVRCASLETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICY
ASNIAKLALTAYGFLIHSISLSEAGVLDEMNSARKSLASSNETSGRLQRVNNDSQLAQLR
KSIAEVVQELVMGPKQTPNIRRALLQDIGNLCCFFGQRQSNDFLLPILPAFLNDRDEQLR
ALFYGKIVYVCFFVGQRSVEEYLLPYIEQALSDQTEAVIVNALDCLAILCKRGFLRKRIL
LEMIEHAFPLLCYPSQWVRRSAVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASE
KSLLLCLKPPVSRQVFYQVLENARSSDMLERQRKIWYNSSAQSKQWEITDVLKREDGELN
SVKSWSDKKVISETQKHDGDVFKKPEDGEAKLRAMGYMSSVSSMVDIRDPLCSEKLQFSG
YMSPQIGGVNSFIYDKSSEGIPLYSFSMDRRAVKIPPAASDSSLRMNSLGIGSSYMPWMD
PVNKSFSLASSVPAPKLVSGSFSISNGSKQFYRVVHEPESRENDQTTYINSKFQEMGLSG
GTKGSSFAVEDASAPTDLAGLPSFSRTTSIPDSGWRPRGVLVAHLQEHRSAVNDIAISND
HSLFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTVMLRNFPQVVVGACDGS
MHVFSVDHISRGLGSVVEKYSGIADIKKKDIKEGAILSLLNYTSDNNASQIVMYSTQNCG
IHLWDIRANANAWTLKAVPEEGYVSSLVTSPCGNWFVSGSSRGVLTLWDLRFLIPVNSWQ
YSLVCPIEKMCLFVTSPNVSVSNTRPMIYVAAGCSEVSLWNAENGSCHQVLRLANYDNDT
EMSDTPWALAKPSSKANFKPDIRRNVSPKYRVDELNDPPSRLPGVRSMLPLPGGDLLTGG
TDLKIRRWDHCSPERSYCISGPNLNGVGNDDLFEIRSSFGVQVVQETKRKHQTTKLTAKA
VLAAAATDSAGCHRDSILSLASVKLNQRLLISSGRDGAIKVWK
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacaagatcgcccgcacaacgcaagtctccgcatcagagtactacctccacgat
ttgccttcctcctacaatttggtccttaaggaggtgcttggccgcggccgcttcttcaag
tctattctctgcaagcacgacgagggtttggttctcgttaaggtttatttcaagcgaggc
gatcccatcaatctcagagagtacgagcgccgtctcgaacaaatcaaggaaaccttcctt
gcccttgaccacccccacgtctggccctttcagttttggcaagaaacagataaagcaggt
tatcttttgaggcaatatttcttcaataatcttcatgatcgattgagtactcgacctttc
ctcagtctagtggagaaaaagtggttggcttttcagttacttcttgctgtgaaacagtgc
cacgagaagggtatttgtcatggtgacattaagtgtgaaaatgtgctggttacttcctgg
aattggctttatcttgctgactttgcatcctttaagccaacttacattccttatgatgat
ccttcggatttctccttcttttttgacactggaggaaggaggctctgttatcttgcacct
gagagattttatgaacatggaggtgagatgcaagttgctcaggatgcaccattaaggccc
tccatggacatctttgctgtagggtgtgtaattgcagagcttttccttgagggtcagcaa
ctgtttgaactctcccagcttcttgcttatcgcagaggacagtatgatcctagccagcat
cttgaaaagatcccagattctggaatccgcaagatgattcttcatatgatccagttagaa
ccagaggctcgactttctgctgaaagctacctgcaaaattatgctaatgttgtgtttcct
gcctacttctcaccatttctacataatttctactgctgctggaatcctcttcattctgat
atgagggttgcaatgtgccagagtgttttccatgaaatacttaaacaaatgatgagcgat
aagacaggagagaatatagaaactgcatctgtgaattccatgagtggtaaactagcgcta
gatatggttgaaaaaccaaacttggacttgacaatggactcagtaaagaatgaaaagaca
gaaaagggtttagttcgtgaccaatacaaacttcttggtgatatcagtacccttcttggg
gatgtaaagcaaagtaatgactatgctggtgtgaatttggggcccgaaagtacacccaat
tctgcattttcccatgacatcaagcaatgtggcatgcaatcacctggtgagcttcttcaa
gcaatctccaatgcatttaggaaaaatgatcatccctttctgaaaaagatcaccatggat
gatttgaattcattgatgtctgagtatgacagtcagtcagatacatttggcatgcctttt
ttaccattacctgaagatagtatgaaatgtgaaggtatggttctgattgcctctctcctc
tgttcctgcatacgcaatgtcaagttgccccatttaaggagaggggctatactactgctg
aagtcgtcttccttatatattgatgatgaagaccgcttgcagcgggtactaccatatata
attgctatgctttctgacccggcagcaatagtgcgttgtgcttccctggagactttgtgt
gacattttacctttagttcgagattttcctcctagtgatgcaaaaatattccctgaatat
attcttccaatgctttccatgcttcctgatgatccagaagaaagtgtgagaatatgttat
gctagcaatatagctaagttggcactaactgcttatggtttcttaattcactcaataagc
ttgagtgaggctggtgttcttgatgaaatgaattcagcacggaagtcactggcatcatcc
aatgagacatctggacgccttcagagagtaaataatgattcacagcttgcacaattgagg
aaatccattgctgaggttgttcaagagcttgtgatgggtccaaaacaaactccaaatatc
aggagagcactcctgcaggacattggcaacctgtgttgcttctttggccagagacagagt
aatgattttcttttacctatccttcctgcatttctaaacgatcgggatgagcagctaaga
gcattattttatggaaagattgtatatgtctgcttttttgtgggacaaagaagtgtggag
gagtatcttctaccttatatcgagcaggccttaagcgatcaaactgaggctgtcattgtc
aatgcactagactgtttggcgatcctctgtaaacgtggcttcttgcggaaaaggatactg
cttgaaatgatagaacatgcctttccattgttgtgttatcctagtcaatgggttagaagg
tcagctgtcacttttattgcagccagcagtgaaagcttaggtgcagtggattcctatgtt
ttcctggcaccagttatacggccttttcttcgcagacaacctgcttccctagcttctgag
aagtctctacttttatgtttgaagcctcctgtctcaaggcaggtattttaccaggttttg
gaaaatgctagaagttcagacatgttggagagacagaggaaaatatggtataattcatca
gcacaatccaaacaatgggaaatcactgatgtactcaaaagagaagatggggaactaaat
tcagtaaagagttggtctgacaagaaagtgatttctgagactcaaaaacatgatggtgat
gtgttcaagaaaccagaggatggtgaggcaaagttgagagctatgggctatatgagcagt
gtttctagtatggttgacattcgtgatcctttatgctcagaaaagttgcaattttcaggc
tacatgtctccacagattggtggtgtcaatagcttcatatatgataagtcctcagagggc
atacctttatactcttttagcatggacaggcgagcagtaaaaattcctcctgcagcttct
gattcttcattgcgaatgaactcacttggaattggttcatcttacatgccttggatggat
ccagtaaataaatcatttagcttggccagttcagtccctgcacctaagctggtttctgga
tcattcagcatcagtaatgggtctaaacagttctacagagtggttcatgaaccagaaagc
agggaaaatgatcaaacaacatacattaacagtaaatttcaggagatgggattatctggt
ggaacaaagggaagttcttttgcggtggaagatgcttctgctccgactgatctagctgga
ttgccatccttttcacggaccacatcaataccagactctggctggagacctcgtggggtg
cttgtagcccatctgcaggagcaccgttctgctgtcaatgatattgcaatttcaaatgat
catagcctgtttgtgagtgcatctgatgattcaactgtcaaggtgtgggattcaagaaag
ttggaaaaggacatctccttcagatcgaggctgacatatcacctggaagggagccgagca
ctttgcactgtaatgcttcgtaactttcctcaagtagttgttggagcatgtgatggctca
atgcatgtattttctgttgatcacatatccagaggccttggcagtgtcgttgagaagtat
tcaggtattgctgatataaaaaagaaggatattaaggaaggtgcaatacttagccttttg
aactatacatctgataacaatgctagtcagattgttatgtatagtactcaaaattgtgga
atccatctctgggatattagagcaaatgcaaatgcatggacattaaaagctgttcctgag
gaaggctatgtgtcttctctagtaacaagcccgtgtgggaattggtttgtctcaggatct
tctaggggtgtgcttacactttgggatctaaggttccttatacctgtgaactcatggcag
tattctctcgtatgccctatagagaagatgtgcctttttgttacttctccaaatgtcagt
gtatctaatacaagacccatgatatatgttgctgctggttgcagtgaagtttctctgtgg
aatgctgagaatgggagctgtcaccaggtactgaggctggcaaattatgataatgatact
gaaatgtctgatacaccatgggccttggccaaaccatccagtaaggcaaactttaaacca
gatataaggcgtaatgtcagtccaaagtatagagttgatgagctaaatgatcctccttcc
cgtcttcctggtgtccgttcaatgcttcctttgcctggaggtgatttgttgactggaggt
actgacttgaagatacgtcgatgggatcattgcagcccggagcgaagttactgtattagt
gggccaaatttgaatggagttggaaatgatgatttatttgaaataagatcaagttttgga
gtgcaggttgtgcaggagacaaaaagaaaacatcaaactaccaagttgacagcaaaggca
gttctggcagcagctgctactgattctgctggctgccatagggattccatcctttctttg
gcttctgtcaagttgaaccaaagacttttgatttcaagtggtagagatggggctatcaag
gtttggaagtaa
DBGET
integrated database retrieval system
