Manihot esculenta (cassava): 110603203
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Entry
110603203 CDS
T05761
Name
(RefSeq) retinoblastoma-related protein isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110603203
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
110603203
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Tet_C_40
DENND11
Motif
Other DBs
NCBI-GeneID:
110603203
NCBI-ProteinID:
XP_021596599
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Position
16:complement(8149165..8158932)
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AA seq
884 aa
AA seq
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MYGADWESRFEAKEQQANFEQLSILSRHYNRAYWELFLTSDANVDKQSAVTSNTAPMSEY
HRFGWLLFLALRVHAFSRFKDLVTCTNGLVSVLAILIVHVPIRFRNFNLNDSQWFVKKDD
KGVDLLASLCNKYDASEDELRKIMEKTNNLIADILKKTPCLASECKNENLDNINTDGLIF
YEDLMEESSLQSSLAILEKDYEDAIRAKGELDERVFINEKDGSLGSGSPSVGATNVTGAK
RKFDFFSSPTKTITSPLSPFRSPASNGILGSTNSKMAATPVSTAMTTAKWLRTVISPLPS
KPSLQLERFLASCDRDVTNDVIRRAQIILEAIFPSSSSGERCVTGSLQSTNLMDNIWAEQ
RRLEALKLYYRVLEAMCTAEAQILHATNLTSLLTNERFHRCMLACSAELVLATHNTVTML
FPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL
TIARPSLSAEINRLGLLAEPMPSLDAIAMHINFSSGGLPPVPSHKPELSPGQNGDTRSPK
RLCTDFRSALVERNSFTSPVKDRLLAFNNLKSKLLPPPLQSAFASPTRPNPVGGGETCAE
TGINIFFSKINKLAAVRINGMVERLQQSQQHVRENVYRLFQQVLSQQTFLFFNRHIDQII
LCCFYGIAKISKVNLTFREIIYNYRKQPQCKPQVFCSVFVDWASARHNGRTGQDHVDIIT
FYNEIFIPAAKPLLVEVGSAGTITKASQVPDANNIHKDGQCPTSPKVSPFPSLPDMSPKK
VSATHNVYVSPLRTSKMDALNSHSSKSYYACVGESTHAYQSPSKDLTAINNRLNSNRKIR
GTLNFDDVDVGLVSDTMVANSLHLQNGSSASTSGAPLKTEQPDS
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgtatggtgcagattgggagagcagatttgaggcaaaggagcagcaagccaactttgag
caactgagcattttaagcaggcattacaaccgtgcatattgggaacttttcttgacaagt
gatgcaaatgttgataagcagtcagcagttaccagcaacacagcacccatgtcagaatat
catcgttttggatggttgctgtttttggcacttcgtgtacatgcgttcagccgatttaaa
gatttggtgacctgcacaaatggtttagtttctgtgctggctattttgatagtccatgtt
ccaatacgcttcagaaatttcaacttgaatgactctcaatggtttgttaagaaggatgac
aaaggggttgatttactggcatctctttgcaacaaatatgatgcctcagaagatgagctg
agaaaaataatggagaagactaacaatttaatagcagatattctgaagaaaacaccctgt
ttggcatctgagtgtaaaaatgaaaacctggataatatcaatacagatggtttgatcttt
tatgaagatttaatggaggaatcatctctgcagtccagtttggctattttagagaaagat
tatgaggatgcaattcgagcaaagggtgaattggatgagagggtatttatcaatgagaaa
gatggatcgcttggttcagggagcccatctgtaggtgccacaaatgtaactggcgctaaa
agaaagtttgattttttttcctcaccaacaaagacaattacaagtcctctttctcctttt
cgatcccctgcatcaaatggcattttaggcagcacaaattctaagatggctgctacacct
gtaagtactgcaatgacaactgcaaagtggcttcggactgttatttctccacttccatca
aaaccctcattacagctggaacgcttccttgcatcatgtgatagggatgtgactaatgat
gtcatacgtagagcacagataatattggaggctatatttccaagtagctcttctggagag
cgttgtgtaactggaagtctgcaaagtacaaacctgatggacaacatatgggcagaacaa
cgaagattggaagcgttaaagttgtattatagggttctggaagcaatgtgcacagcagag
gcccaaatattgcatgcaactaatttgacctctttattaactaatgagaggttccacaga
tgtatgcttgcatgttctgctgaacttgtcctggcaacgcataacactgtcacaatgctc
tttcctgcagttctggagagaactgggattacagcttttgatcttagcaaggtgatagag
agcttcattagacatgaggaatctcttccgagggagttgaggcggcatttgaattcattg
gaagaaagacttctggagagcatggtgtgggaaaagggttcctcaatgtataattccttg
accatagcaagaccctctctttctgcagagataaatcgacttgggctattagcagaacca
atgccatctctggatgctatagcaatgcatatcaacttttcttctggaggtttgccacct
gtgccttcacataagcctgagttgtctccaggtcagaatggggataccaggtctccaaag
agactatgcacagatttccgcagtgcattagtagagcggaactcttttacatcaccagtg
aaggatcgtctacttgcctttaataaccttaaatccaagctgctgccacctcctttgcag
tctgcctttgccagtccaacacgtccaaaccctgtgggaggaggggaaacatgtgcagaa
actgggatcaatatattctttagcaagattaacaagttagctgctgtcagaatcaatggt
atggttgaaaggttacaacaatctcagcagcatgtaagagagaatgtctatcgccttttc
caacaagtccttagccagcagacctttttgttctttaaccgccacattgaccagattatt
ctttgttgtttctacggaatcgcaaagatttctaaagtgaatctaaccttcagggagatc
atttacaactataggaagcaaccacaatgtaaaccacaagttttctgtagtgtgtttgtt
gattgggcatcagcacggcataatgggaggacaggacaagatcatgttgacattatcaca
ttttataatgaaatattcattcctgctgcaaaacccctgctggtggaggttggttctgct
ggaacaattacaaaggccagccaggttcctgatgccaataatattcataaagatggtcaa
tgtcccacatcacctaaagtatctccttttccaagtctgcctgacatgtctccaaagaaa
gtatctgcaactcataatgtgtatgtctctccattgcggacatccaagatggatgcctta
aactcgcacagctcaaaaagctattatgcatgtgtgggagagagcactcatgcataccag
agtccttcaaaagacctgactgctatcaacaatcgattgaatagtaataggaagatcagg
gggacattaaatttcgatgatgttgatgttggtttggttagcgatacgatggtggccaac
agtctccaccttcaaaatgggagtagtgcatccacatctggtgcgcctttgaaaactgag
caacctgactcttaa
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