Manihot esculenta (cassava): 110603401
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Entry
110603401 CDS
T05761
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110603401
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110603401
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110603401
Protein phosphatases and associated proteins [BR:
mesc01009
]
HAD phosphatases
Fcp/Scp phosphatases
110603401
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110603401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
110603401
NCBI-ProteinID:
XP_021596808
LinkDB
All DBs
Position
16:2678610..2688097
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AA seq
965 aa
AA seq
DB search
MYKSAVYRGDELLGEVEIYPQQQQEEEEKEENHNKKRVINEILTGKEIRISHFSQQSERC
PPLAVLHTITCGMCFKMESKNSLSLDTPLHLLHSSCFQENKTAIVPLGGEELHLVAMYSR
NSEGQYPCFWVFNVSAGLYNSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRK
ISSEMDPQRISGMLSEVKRYQDDKTILKQYVENDQVIENGRVIKTQFEVVPALSDNHQSI
VRPLIRMQEKNIILTRINPQIRDTSVLVRLRPAWEELRSYLTARGRKRFEVYVCTMAERD
YALEMWRLLDPESNLINSKELLDRIVCVKSGSRKSLFNVFQDGICHPKMALVIDDRIKVW
DDKDQPRVHVVPAFAPYYAPQAEANNAVPVLCVARNVACNVRGGFFKEFDEGLLQRISEI
SYEDDMRDIPSPPDVSHYLVSEDDAATSNGHKDPLLFDGMADAEVERRLKEALSASSMFS
STVTNLDPRLVPPLQHGVASSSSSTPVATSQPSVMPFASMQFPQATSPVKPLAQVGPPEP
SLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDHAPNEQQIPVRPSMQVSVPRVQS
GGSWVPVEEEMSPRQLNRAISREFPLDSEPLHLEKHRPHHTPFFPKVDNSIPSDRMLHEN
QRLPKVLQAPHRDDRLKINHTMSNYHSFSGEEIPLSRSSSSNRDLDFESERAVPSAETPV
GVLQEIAMKCGAKVDFRPSLVDSRDLQFSIEAWFAGEKVGEGIGRTRREAQHLAAEGSIK
NLANIYMSRDKSDNGTLHGDASRYPSANENGYLGNLHSFGCQQLPKDEPVSSAASSEPSR
LLDPRLEGSKKSMGSVTTLKELCMMEGLGVNFLAQTALSSNSGQKDEVHAQVEIDGQVMG
KGIGSTWEEAKMQAAERALRTMYGQFPPKRQGSPRPMQGMSNKRLKVLQRMPSSARYPKN
APPVP
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatcggcagtgtatagaggggatgaattacttggagaagtagaaatatatcca
caacagcaacaagaggaagaagaaaaagaagagaatcacaacaagaagagagtgataaat
gagatattgacggggaaggaaatcagaataagccatttttctcaacaaagtgagaggtgt
cctccactggcagtgctacataccattacatgtgggatgtgcttcaaaatggagtccaag
aattcactctctcttgacacgccgcttcatcttttgcactcctcctgtttccaggaaaac
aagactgccatagtgccactaggaggggaggagctccatttggtggcaatgtattctaga
aacagtgaaggacagtatccatgcttctgggttttcaatgtctcagcagggctttacaat
tcttgtcttgtcatgctgaatctcagatgtcttggcattgtatttgatcttgacgagact
ctcattgttgcaaacacaatgcgatcatttgaagatagaatagaggctctgcagaggaaa
ataagctctgagatggacccacagcgtatttctggtatgctgtcagaggtaaagcgttat
caggatgacaagaccattttgaaacaatatgtggaaaatgatcaggttattgaaaatgga
agggtgatcaaaactcagtttgaggttgttcctgcattgtctgacaatcaccaatctata
gtgcgcccattgatacgaatgcaagaaaagaatattattttgacacgcatcaacccacag
attcgtgatactagtgtccttgtgaggttgagacctgcatgggaagaacttagaagttac
ttgactgctagagggcgcaaacgttttgaggtttatgtttgcacgatggctgaaagagat
tatgctttagaaatgtggaggcttcttgatccagagtcaaacttgataaactcaaaagaa
ttattggaccggattgtgtgtgtcaaatctggttcaaggaagtcattgttcaacgttttt
caagatggaatatgccatcctaagatggcattggtgattgatgatcgcataaaagtgtgg
gatgacaaagatcaacctcgggtgcatgttgttcctgcatttgctccgtactatgcgcca
caagctgaagcaaataatgctgttccagtgttgtgtgttgcaagaaatgttgcctgcaat
gtcagaggtggtttcttcaaagaatttgatgagggtcttctacaaaggatatctgagatt
tcatatgaagatgatatgcgtgacatcccttctccccctgatgtgagccactatttggtt
tcagaggatgatgctgctacttcaaatggacacaaagatccacttttgtttgatggcatg
gcagatgctgaggttgaaagacgattaaaggaagcactttcagcttcttcaatgttctct
tcaacggtcaccaatctagatccaaggcttgttcctcctcttcagcatggagtggcatct
tcttcaagttcaactccagtggcaacatcacagccatcggtaatgccatttgcaagcatg
cagtttcctcaggcaacttcaccagtcaaaccattggctcaggttgggcctccagaacca
agcttgcaaagttctcctgctagagaagagggtgaggtgccagaatcagaattagatcct
gatacaaggaggcggctccttatattgcaacatggacaagatactagagatcatgcacca
aatgagcaacaaattcctgtaagaccttcaatgcaagtttcagttccacgggtgcaatct
ggtggaagctgggtaccggtggaggaagaaatgagtcctaggcaactgaaccgagcaata
tcaagagaatttcctctggattcagaaccattgcaccttgaaaagcaccgacctcatcat
acacccttttttcccaaggttgataactctattccatctgatagaatgcttcatgagaat
caaagattgccaaaagtgctgcaggcacctcatagagatgatcggttgaaaataaaccat
accatgtccaattatcattctttctcaggggaggaaattccattgagtcgatcatcctcc
agcaaccgagatcttgattttgaatctgaacgagctgttccaagtgccgaaacaccagtt
ggagtgttacaagaaattgcaatgaagtgtggagccaaggtggatttcaggccttcactg
gtcgatagcagagatttgcagttctccattgaggcttggtttgcaggagagaaagttggt
gaaggaattggtagaacaagaagggaagcccaacatcttgctgctgagggttctattaag
aacctggcaaacatatatatgtcacgagataagtcagataatgggacattgcatggggat
gcgagcagatatcctagtgcaaatgaaaatggctatttgggtaatctgcattcttttggg
tgtcagcaattgcccaaagatgagcctgtctcatctgctgcaagctcagagccatcaagg
cttctggatccaagactggaaggctctaagaaatcaatgggttcagttactacacttaaa
gaattatgcatgatggaaggccttggagtaaattttctcgcacagacagcactctcttct
aattcaggccagaaggatgaagtacatgcacaggtcgaaatagatggacaggttatgggg
aaggggattgggtcaacatgggaggaggcgaaaatgcaggctgctgaaagggccttaaga
acaatgtacggtcaatttccaccaaaacgtcagggttccccaaggccaatgcaagggatg
tcaaacaaacgtttgaaagttctgcaacggatgccgtcatctgctagatatcccaagaat
gctcctcctgttccttga
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