KEGG   Manihot esculenta (cassava): 110603609
Entry
110603609         CDS       T05761                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 2 homolog 2 isoform X1
  KO
K12191  charged multivesicular body protein 2A
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    110603609
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mesc04131]
    110603609
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mesc04147]
    110603609
Membrane trafficking [BR:mesc04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    110603609
Exosome [BR:mesc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110603609
  Exosomal proteins of other body fluids (saliva and urine)
   110603609
  Exosomal proteins of colorectal cancer cells
   110603609
SSDB
Motif
Pfam: Snf7 YlqD DUF6779 Cep57_MT_bd DtrJ-like MerR-DNA-bind Flagellin_C DUF2666
Other DBs
NCBI-GeneID: 110603609
NCBI-ProteinID: XP_021597093
LinkDB
Position
16:24428120..24438051
AA seq 228 aa
MNIFKKKTSPKDSLRVSKREMAVATRGIEREIASLQLEEKKLVAEIKQTAKTGNEAATKI
LARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAK
QAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSS
APKGRIASKNASNAVKSVESPNVEDLEKSADSSDVEDLEKRLASLRRI
NT seq 687 nt   +upstreamnt  +downstreamnt
atgaacatcttcaagaagaaaacctctcctaaagattccctcagggttagtaagagagaa
atggctgttgccaccagaggtattgaacgtgaaattgcatctcttcaattagaggaaaag
aagttggtggcagagatcaagcaaacagcaaaaactggaaatgaggctgctactaaaatc
ttagcacgtcaacttgttcggctgcggcaacaaataacaaacttgcaaggaagtcgtgcc
caaattagaggtgtagctacccatacacaggcgctatatgctagcacatcaatttctaca
gggatgaaaggagcaactaaggctatggtcgctatgaataagcaaatggctcctgcaaaa
caagctaaagtaataaaagaattccagaagcagtcagcacaactggatatgacgattgag
atgatgtccgagtctattgatgaaactttagacaaagatgaggctgaagaagaaacagag
gagcttactaaccaggtgcttgatgagattggtgtcgatattgcatctcagttatcttca
gctccaaagggacggatcgcgtcaaagaatgcttctaatgctgttaaaagtgttgaatct
cctaatgttgaggatcttgaaaaaagtgctgactcttctgatgttgaggatcttgaaaaa
aggttggcctcccttcgacgtatttga

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