Manihot esculenta (cassava): 110603656
Help
Entry
110603656 CDS
T05761
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mesc01001
]
110603656
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110603656
Enzymes [BR:
mesc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
110603656
Protein kinases [BR:
mesc01001
]
Serine/threonine kinases: Other
Other
110603656
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110603656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
LisH
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
DUF4310
ARM_ARMC5
EIF3I
Motif
Other DBs
NCBI-GeneID:
110603656
NCBI-ProteinID:
XP_021597164
LinkDB
All DBs
Position
16:complement(34148163..34158356)
Genome browser
AA seq
1936 aa
AA seq
DB search
MDESSSQAQGLAAGAPPSVTVDAQSQLQSQQERGVGEGVEEGTTKEVEELLEKAQKLIDK
ITSSPDNPNPTVLHALSSLLEAQESLYMEKSGHSPFNNNRASHSIGRLGNLVRDNDEFFE
LISSKFLSETRFSTSIQAAASRLLMSCSLTWIYPHVFEEPVIENIKSWVMDESVKFSGED
RYWKHDLGKKEASDSEMLKTYSTGLLAVCLAGGGQIVEDVLTSGLSGKLMHFLRIRVLGE
TSTNHKDSTYLMESKNVSSASCVRGREEGRGRVRQVLEATHVDNSKLTDERALDDPISVE
PLDRLPDGFGMVDSDGRDKLQGRDPRDGKTKFGDFDESGRDDSLRCRPSRGWPRPRGKGR
ANESGCENEQVLTSLGSGSRSGQGRSSRDRNLMKNFDLRREQDARKCPGTINPDGLPLER
EDSDDCFQECRIGTKDISDLVKKAVRAAEAEARAANAPTEAIKAAGDAAAEVVKSAALEE
FRSSNNEEAAVLAASRAASTVIDAANAIARDRNSNINDDSVPVGGTETEALDDAEEYFIP
DSESLAQIREKYCIQCLEILGEYVEVLGPVLLEKGVDVCLALLHRSSKHKEASNGAALLP
DVMKLICALAAHRKFAALFVDRGGMQKLLAVPRVEQTFFGLSSCLFTIGSLQGIMERVCA
LPSDVVNQVVELALQLIDCPQDQARKNAALFFGAAFVFRAIVDAFDGQDGLQKLLGLLND
AASVRSGVNSGALNLSNSATLRNDRSPTDVLTSSEKQIAYHTCVALRQYFRAHLLLLLDS
IRPNKNNRSAARNIPSVRAAYKPLDISNEAMDTVFLQLQKDRKLGSAFVKTRFPAVDKFL
GFNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVNDSRKMIVNSTLSNNRVGIAVI
LDAANISGNYVDPEIIQPALNVLINLVCPPPSISNKPPVLAQGLQTVSGQLANPTALEPR
DRNAERSQGELRERNGESSAGDRGSAAVSAARSISSTSQTPVPTATSGLVGDRRIFLGTG
AGCVGLAAQMEQGYRQAREAVRANNGIKVLLHLLQPRIYSPPAALDCIRALACRVLLGLA
RDDTIAHILTKLQVGKKLSELIRDSGSQTSGTDQGRWQELTQVAIELIAIVTNSGRASTL
AATDAATPTLRRIERAAIAAATPISYHSRELLLLIHEHLQASGLAATAATLLKEAQLTPL
PSLAAASSLMLQASTQETPAVQLQWPSGRTPYGFLCNKLKASVHEDDPSLRCDSVLYSKK
KPIVFSPTFGLQSRNHCVSHDSSQSSSKKALGGLKQFATPGNLLEAPSESLPKNNPDTES
LCKTPILLPMKRKLSDLKDIGFASSGKRVSTSEHGLRSPVCLTPNAVRRSSLFGDAIGFS
TPSSNLRDYGRSTPSSLVDYGDDNQYSNSTQLGLANDHQPSNSERLTLDCIVVQYLKHQH
RQCPAPITTLPPLSILHPHVCPEPRRSLDAPSNVTARLGVREFRSIYGGVHGSRRDRQFV
YSRFRLLRTCRDDADALLTCITFLGDSSHIAVGSHNGELKIFDSNSNGVLESCTSHQSPL
TLVQSYLSGETQLLLSSSSQDVRLWDASSISGGPMHSLEGCKAARFSNSGSLFATLTTEA
ARREILLYDVQTCHVESTLSDTISTSTGRGHVYSLIHFSPSDTMLLWNGVLWDRRQSGPV
HRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFKLLRSVPSLDQTAITFNACGDVIYAIL
RRNLDDVMSAVHTRRVKHPLFAAFRTVDAINYSEIATIPVDRCVLDFASEATDSFVGLIT
MDDQDEMYSSARIYEIGRRRPTDDDSDPDDAETEEDEEEDDEDDVDVDPMLGPDLDGDGD
SDADDISNEDDDDDSVSELDDEDDGDFIMDDVDFDGGAGILEIVAEGDEDDDDDSQVVES
YSSSEENDFVDNGFNY
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatcatcgagccaagcccagggcctggctgcaggcgctcctccttctgtgact
gtggatgctcaatcccaattgcaatcgcagcaggaaagaggagtaggagaaggcgtggaa
gagggaacaaccaaagaagtggaagaattgctggagaaggcacagaaattgatagataag
atcacatcttcccctgataaccctaatcctaccgttctccacgccctttcctctctcctc
gaagctcaggaatctttgtacatggaaaagagtggacattcaccttttaataataatcgt
gcttctcatagtattggccggcttgggaacttagtgcgggataatgatgaattttttgaa
ttgatttcttcaaagtttctttctgaaactagattttcaacctctattcaggcagctgct
tcaaggcttctcatgagctgttcactaacttggatttatccacatgtttttgaagaacct
gtaatagaaaacataaaaagctgggtgatggatgagagtgtgaaattttctggtgaggat
cgctactggaagcatgatttggggaaaaaggaggcctcagattctgaaatgttgaagaca
tattcaactggacttcttgcagtatgtttggcaggtggtggtcaaatagttgaggatgta
ctgacatctggattatctggaaagcttatgcactttcttcgcattcgtgtccttggggag
acaagtacaaaccataaagactctacttacttgatggaaagcaagaatgtatcttctgct
tcttgtgttagaggcagagaagagggtaggggtagggtgcggcaggttctggaggcaact
catgtagataattctaagttaacagatgagagggctttggatgatcccatcagtgtagag
ccacttgataggttacctgatgggtttggaatggttgactctgatggtagagacaaatta
caaggtcgagacccacgggatggaaaaacaaaatttggagattttgatgagagtgggaga
gatgactcattgagatgcaggccttcacgtggatggccaaggcctagaggaaagggaaga
gctaacgagtctggttgtgagaatgaacaggttttgacatctctaggatctggtagccga
tcaggacagggacgaagttctagagataggaatttgatgaaaaattttgacttgagaaga
gaacaagatgcaagaaagtgtccaggaactatcaatcctgatggtttacctctggagagg
gaggattctgatgattgctttcaggagtgcagaattggaaccaaagacatttctgatctg
gtaaagaaagcagttagagctgctgaagctgaagctagagctgcaaatgcacctactgaa
gccatcaaagcagctggtgatgctgctgctgaagttgttaagagtgcagccttagaggaa
tttagatcttccaacaatgaagaagctgcagttctagcggcttccagagctgcatctact
gttattgatgctgctaatgcaattgctcgtgacaggaacagtaacatcaatgatgactcg
gtgcctgttggtggtacagaaacagaagcacttgatgatgctgaagaatattttatccct
gattctgagtcacttgcacagattagggaaaagtattgcatccagtgccttgagatatta
ggagaatatgtagaagttcttgggcctgtcctgcttgaaaagggagtagatgtttgtctt
gcattattgcatcgcagttctaaacacaaggaagcatcaaatggagcagcactcttgcct
gatgtgatgaagctcatctgtgctttggctgctcatcggaaatttgcagctttgtttgtg
gatcgaggtggcatgcagaaattgcttgctgtccctagggtagaacaaacattttttggt
ctttcttcgtgcttatttaccattggttctcttcagggtataatggaacgtgtatgtgca
cttccttctgatgttgtcaaccaagtggttgaattagctcttcaacttattgattgccct
caggatcaagcccggaaaaatgcagccttattttttggcgctgcatttgtcttcagagct
attgtcgatgcttttgatggccaggatggtttacagaagttactgggccttttaaatgat
gctgcctcagtaagatctggtgttaattcaggtgcattaaacctgtctaattcagcgact
cttcgtaatgatcggtcaccaacggacgtactgacctcatcagagaagcagattgcttat
cacacttgtgttgctttacgacagtacttcagagcacatcttcttttgctattggattct
attcgtcccaataaaaacaatcgaagtgcggctagaaacattccaagtgtaagggctgct
tacaaaccccttgacattagtaatgaggctatggatacagtctttctgcagctacagaag
gatagaaagttgggttctgcatttgtgaagactcgatttcctgcagtggacaagttcttg
ggctttaatgggcatattaccatgttggaattgtgtcaggccccacctgttgagcggtat
ttgcatgacttgcttcagtatgcattgggtgttctgcacattgttacactggtaaatgac
agccgcaaaatgattgtaaatagcacactaagcaataatcgtgttggtatagctgtaatt
ttggatgcagcaaatatttctggtaattatgtggaccctgagattatacagcctgcattg
aatgtgttaatcaatctcgtttgtccacccccttcaattagcaacaaaccccctgttctt
gctcaaggcctgcagaccgtttctggtcaacttgcaaatcccactgctttggaacctaga
gatagaaacgcagaacgcagccagggtgagctaagggagcggaatggagaatctagtgct
ggtgatcgaggctctgcagcagtttctgctgctcgatccatcagtagcacatcacaaact
cctgtccctactgcaacttcaggattggttggagatagaagaatctttttaggtactgga
gcaggttgtgttggccttgctgcacaaatggaacaagggtatcgtcaagcaagagaggct
gttcgagccaacaatggcataaaggttcttctccaccttctacaaccacgcatatattca
cctcctgctgctcttgactgcattcgtgctcttgcatgccgagtactgcttggtctagcc
agagatgatacaattgctcacatattgactaaacttcaggttggcaaaaaattgtcagag
ctaattcgagattcaggtagccaaacatctggaactgaccaaggcaggtggcaagaactt
acccaggtggcgattgaactaattgcgatcgtaacaaattcagggcgagccagtacactg
gctgctactgatgctgctacccctacactaaggcgcatagaaagagcagcaattgctgct
gcaacgcctatctcctatcattctagggaacttctactcctcatacatgaacaccttcag
gcttctggtttagctgcaactgctgctacactgctgaaagaggctcagttgacacctttg
ccttcgctggcagctgcatcttccctcatgctccaagcctccacacaagaaactcctgca
gttcaacttcagtggccctctggtcgaacaccttatggatttctatgcaacaaattgaaa
gcaagtgtacatgaagatgatcccagcttgagatgtgactcagttttgtattcaaagaag
aaaccaattgttttctccccaacttttggtttacagtcgagaaatcattgcgtgtcccat
gattccagtcaatcatcatccaagaaggccttaggtggtttgaaacagtttgctactcct
ggaaatttattagaagcaccatcggaatccttgccaaaaaataatcctgatacagagtct
ttatgtaaaactccaattctacttccaatgaaacggaaattatcagatctgaaagatatt
ggatttgcttcatctgggaagcgggtcagcactagtgagcatggacttcggtctcctgtt
tgtttgactcccaatgctgtgcgtaggagcagtttgtttggagatgctattgggttttct
actcctagttctaatttgagggattatggtagatcaacacccagcagtttggtagattat
ggagatgacaaccaatatagtaactctacccagcttgggcttgcaaatgatcaccaacca
agcaactcagagcgattaactcttgattgtattgttgttcagtatctgaagcaccagcat
cgccagtgccctgctcctataaccactcttcctccactttctatcttacaccctcatgtt
tgtcctgaaccaagaaggagccttgatgccccatcaaatgtgacagctaggcttggtgtt
cgtgagttcagaagtatatatggtggggttcacggaagtcgccgggatcgccaatttgtt
tacagcagattcaggctgttgagaacttgcagggatgatgctgatgcccttttgacatgc
ataacttttcttggggattcatctcatattgcagttggctctcataatggagagcttaag
atttttgactccaacagcaatggtgttcttgagagctgcacaagccaccagtctccttta
acacttgttcagtcatatctttctggggaaacacaactgctgctctcttcaagttctcag
gatgtgcgcttgtgggatgcctcttcaatctcaggtgggcctatgcattcacttgaaggg
tgcaaggctgcaaggtttagtaattctggaagtttatttgcaaccttaacaactgaggca
gctcgacgagaaattctcctctatgatgtccaaacctgtcatgtggaatcaaccctatca
gatacaatttcgacttctacaggtcgggggcatgtatattcccttatacactttagtcct
tcagatacaatgttgctttggaatggggtcttgtgggataggcgacagtctggtcctgtt
catcgctttgatcagtttactgattatgggggtggaggctttcatcctgctgggaatgag
gtgattataaattctgaggtttgggatcttcggaaatttaagctccttcgaagtgtaccg
tcactggaccaaacagcaataacatttaatgcatgcggtgatgtaatttatgcaatcttg
aggagaaatcttgacgatgtaatgtcagcagttcacacccgtcgagtaaagcacccccta
tttgcagcttttcgcactgtagatgcaatcaattactcagaaattgctaccataccagta
gatcgatgtgtccttgattttgcatcggaggcaactgattcctttgttgggttgattaca
atggatgaccaagatgagatgtattcttctgctaggatctatgagattggtcggcggagg
ccaactgacgatgactctgatcctgatgatgctgaaacagaggaagatgaggaggaggat
gatgaagatgatgtggatgtggatcccatgttgggtccagacctggacggggatggggac
agtgatgctgatgatataagcaacgaggatgatgatgatgatagtgtgagtgagcttgat
gatgaggatgatggggacttcattatggatgatgtagactttgatgggggagctgggata
ctggagattgtggccgagggagatgaggatgacgatgatgatagtcaagtggttgaatct
tacagcagcagtgaggaaaatgactttgtggataatggttttaattattaa
DBGET
integrated database retrieval system
