Manihot esculenta (cassava): 110603668
Help
Entry
110603668 CDS
T05761
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110603668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110603668
03036 Chromosome and associated proteins [BR:
mesc03036
]
110603668
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110603668
Coactivators
SAGA/TFTC/STAGA complex
110603668
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110603668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
110603668
NCBI-ProteinID:
XP_021597185
LinkDB
All DBs
Position
16:29505693..29511343
Genome browser
AA seq
913 aa
AA seq
DB search
MDPSIMKLLEEDEDETMHSGADVEAFQAALNRDIGGDASTPQPSDSSVFSHEINQTPNQS
FSNWQTTTQGENASGASQQQQEKDQHSSLMGPKHLSSAAENQQVHNDVMQESSQLLLHQK
RPQDDVQKAQAEQVPLPNPRTPGMQISERNPMPLSERDKIQNPDTESQYLKVNMVNQQNQ
QAMGMEQPGNAKNQGKQIPFVLLLPALKPHLDKDREMQLQTLFNKLRKNEIAKEQFVRLM
RNIVGDQVLRLAVAKLQSQPGSNQSHLQSQAFARQHNVRTSVGSTASSAGTVQADPSFLS
AENNNQKSREVEHQPDSHGIQASQMPSSSAIVNQDRERSSISVPGHSKQEQHMRFQQTAF
PVYGSNSATYQPYAGTNANTSGSSMKPQPHDLQMRQISHQSVGATQMGGSTQAINMLSVP
KFERQNPVADPNRLQSGPISPYTNKSLLQQSSVPWKAPMTKGQSSGPSSTNYVKQEPFEQ
AIEQQQKSQLSNSQGLPVTPAEQGKSVPGNLKDESLEKQSSKVGCSAPIGMAPSNSVPPS
ISTQLDPNVQVGSRIPSVAASAGIPARTPPKKPLIGQKKPLEALGSSSPMSSKKQKVSGA
FSDQSIEQLNDVTAVSGVNLREEEEQLFSGSKEESRVSEASRRVVQEEEERLILQKIPLQ
KKLAEIMAKCGLKNINNDVERCLSLCVEERMCGLISNLIRLSKQRVDAEKPRHWTVITSD
VRQQIMAMNQKAKEEWEKKQAEAEKLQKVNEPEGDDGVEGDKEKDEGRMKSMKANKEEDD
KMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTEATSGSQLSKDVSRKSTSGRN
MKDNQEPEKRSPASASRAVRKIGRHQASAPQIRVARTITLKDVIAALEREPQMSKSTLIY
RLYERIRSDASTE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggacccttcaataatgaagctcctcgaagaagacgaggacgaaactatgcattccggt
gctgacgtcgaggcgtttcaggctgcactgaatcgagatattggaggcgatgcgtccact
cctcagccgtctgactcctcagttttttcccatgaaatcaatcaaactcccaatcaatca
ttttcaaattggcaaactaccacacaaggtgaaaatgccagtggtgcaagccagcaacaa
caggagaaagatcagcactcatctttaatgggaccaaagcatcttagttctgctgctgaa
aatcagcaagtacataatgatgtcatgcaggaatccagtcagctcctattacatcagaaa
cgaccccaagatgatgttcaaaaagcgcaggcagaacaagttccccttccaaatcctcga
acacccgggatgcagatttctgaaagaaatcctatgccactttctgaacgtgataaaata
caaaatccagacactgaatctcaatacttgaaagttaacatggttaatcagcagaatcaa
caggccatgggcatggagcaacctggtaatgccaagaatcaaggcaagcagatacctttt
gtgttattgttgcctgccttaaagccccatcttgacaaagacagagagatgcaacttcag
actctgtttaataaactgaggaaaaatgaaattgcgaaagaacaatttgtcaggcttatg
agaaatattgtaggggaccaggtgctaaggttggcagtagcaaaattacagtcacagcca
ggttccaaccaatcccacttacaatctcaagcttttgcacgccaacacaatgtgagaaca
tctgttggttctactgcctcttcagcaggcacagtgcaagctgatcctagcttcttatct
gcagaaaataataatcagaaatctcgcgaggtggaacatcagccagattctcatggaata
caagcaagtcaaatgccttcctccagtgctatagtcaatcaagatagggagaggtcttca
atttctgtgccgggacatagcaagcaggagcaacatatgcgttttcaacagactgccttt
ccagtgtatggaagtaatagtgctacttatcagccatatgctggaacaaacgccaacact
tcagggtcatccatgaagccgcaacctcatgatttacaaatgaggcaaatttcacatcaa
tctgtgggtgcaactcaaatgggaggttcaacccaggcaataaacatgttgagtgttcca
aaatttgagaggcaaaatcctgttgctgatcccaacagattgcagagtggtcctatttcc
ccgtatacaaacaaatcactattgcaacaaagttcagttccgtggaaagcaccaatgact
aaagggcaaagttctggcccttcatcaacaaattatgtaaaacaagaaccatttgaacag
gctattgagcagcagcagaaatctcagttgtctaactctcagggtttgcctgtcacacct
gctgaacaggggaagtcagtgccaggaaatttgaaggatgagtctttagaaaagcagtct
tcaaaagttggttgctctgcacctattggtatggcgccctcaaattcagttcctccttcc
atttcaactcaactggacccaaatgttcaggtaggctctaggatcccatctgtagctgct
tctgctggaattcctgcaagaacacctccaaagaaacctttgattggccaaaaaaaacca
cttgaagcacttggttcttcttcacctatgtcaagtaagaagcaaaaagtgtctggggcc
ttttcagatcaaagcattgaacaactcaatgatgtcactgctgtcagtggagttaatcta
agggaagaggaagagcagctattctctgggtccaaggaggaaagtcgagtttcagaagca
tctcggagagttgtacaagaagaagaagaaaggttgattctgcagaaaattccactgcag
aaaaaattggcagagatcatggctaagtgtggtttgaagaatatcaacaatgatgtggag
cgatgcttatctttgtgtgtggaggaaagaatgtgtggactaataagtaacctgatccgg
ctgtccaagcagcgggtggatgctgagaagcctagacactggaccgtaatcacctcagat
gttcgacagcaaatcatggcgatgaaccagaaagctaaggaagaatgggagaaaaagcag
gctgaagcagaaaagcttcaaaaagttaatgaacctgagggggacgatggagttgaaggt
gataaggagaaagacgaaggtcgtatgaaatcaatgaaggcaaacaaagaggaagatgac
aaaatgaggacaacggctgcaaatgttgctgctcgagctgctgttggtggggacgacatg
ctgtcgaaatggcaactcatggctgagcaagcacgccagaaacgtgaaggtgggacagag
gcaacatccggttcccaactatctaaagatgttagccgcaagtcaacctctggaagaaat
atgaaggataatcaagaaccagaaaaaaggagccctgcatctgcatcaagagctgttagg
aaaattggaaggcaccaagcaagtgcgccgcaaataagggttgcccgcactattactctt
aaggatgtaattgcggcgctggaaagagaaccccagatgtccaagtctactctgatttat
cgattgtatgagagaatccggtctgatgcctcaactgaatga
DBGET
integrated database retrieval system
