Manihot esculenta (cassava): 110603860
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Entry
110603860 CDS
T05761
Name
(RefSeq) YTH domain-containing protein ECT1 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110603860
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110603860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
110603860
NCBI-ProteinID:
XP_021597531
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Position
16:complement(14943604..14948273)
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AA seq
572 aa
AA seq
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MAAPIQKHTKTPVEEMMRNLKVNEASVELRDSMVPSNDGSPSDTTSCISSAGDATVNAKE
GDVDRESVVTDQGLPNPACGYYGYFYPGYDGTHGGVDDQAYYVAGDGMEIQYPVMQADNG
SLVYLMPGIYPGHSPYLPVTMVAIDGQHVGQHPYPSNTIFQPSIAPGYFPTPFLMPPPYL
WDPSTFVGGGYGNDYSGIVEISGAKPNMSSHSHTHAHSKNFLTPDFSDSLKNKTALQSLE
VPSGHGTHNQLKSVAKSDVPREGYLPFAKFPPYNQGKGGVLYTVAPVKASARGWSNSERP
KARSKISNISNFGSLTEQNYVPRTTNSKGSFAFGGNAAGSLDSDGTGNSNSLTSVIRRDQ
YNLPDFPTKYDHAFFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDSAYQDAQKKIAEKG
SNCPVFLFFSVNASGQFCGVAEMIGQVDFNKNMDFWQQDKWNGYFPVKWHIIKDVPNPQL
RHIILENNENKPVTNSRDTQEVKFPQGMEMLNVFKSHVSKTSILDDFDFYESRQKVMQEK
RLRSLVTHLDHNQQKADELIGEEIEASGKAKE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccaattcaaaaacacactaaaacacctgttgaagaaatgatgaggaatctt
aaagttaatgaagcttctgtcgaactcagagattctatggttccttcaaatgatgggagc
ccgtcagatacaacttcctgtatttcatcagcaggagatgcaacagtcaatgccaaggaa
ggcgatgttgatcgtgaatccgtggtaactgaccaaggcttacctaacccagcttgcggg
tactatggatatttctacccaggttatgatggtactcatggaggggtggatgaccaagca
tactatgtagctggtgatggaatggaaattcaatatcctgtcatgcaagcagataatgga
tctttggtctacttaatgccaggaatatacccaggtcacagtccatatttacctgtaacc
atggttgctatagatggacaacatgttggccaacatccatatccttcaaacactattttc
caaccgtctattgcccctggatattttccaactccttttctaatgccaccaccctacctg
tgggatccatctacttttgttgggggaggatatggaaatgattatagtggaattgtggaa
atttctggtgctaagcctaacatgtcatctcacagtcatacacatgctcattcaaaaaat
tttttgactccggactttagtgattctctaaaaaataagactgcccttcagtcattagaa
gtgccatctggtcatggcacgcacaaccagttaaaatcagtggccaagtcagatgtaccg
cgtgaaggttatttgccatttgccaagtttccaccatataatcaagggaagggtggggtg
ctctatacagttgctcctgttaaagcaagtgcaaggggttggagcaacagtgaaaggcca
aaagcaagaagcaaaattagtaacattagcaattttggctcacttactgagcagaattat
gtccctaggacaacaaattcaaaaggttctttcgcttttggaggtaatgctgctggatct
ttggattctgatgggaccggaaacagtaacagcctaacttctgtaattaggagggatcaa
tataaccttcctgattttccaaccaaatacgatcatgcatttttctttgttatcaaatct
tacagtgaagatgacattcataagagcatcaagtacaatgtttgggccagtacccctaat
ggaaataagagactagatagtgcgtatcaagatgcacaaaagaaaattgcagagaaaggc
agcaattgtcctgtgttccttttcttttcggtaaatgcaagtggtcaattctgtggagta
gctgagatgattggccaagtggatttcaataagaacatggatttctggcaacaggacaag
tggaatggttattttccagtcaagtggcatattattaaagatgttccaaacccacaatta
cggcatataatacttgagaacaatgagaataagcctgtaactaatagtagagacacccag
gaggtcaaatttccacagggtatggaaatgttaaacgtgtttaagagccatgtttccaaa
acatcaatactggatgattttgatttttatgaaagccgccaaaaggtgatgcaagagaaa
cggctcaggtcattggtgacccatttggatcataatcagcagaaagcagatgaattaatc
ggggaagaaattgaagcaagtggcaaagcaaaagaataa
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