Manihot esculenta (cassava): 110603934
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Entry
110603934 CDS
T05761
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110603934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110603934
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110603934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U3_assoc_6
UTP6_C
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
Motif
Other DBs
NCBI-GeneID:
110603934
NCBI-ProteinID:
XP_043808019
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Position
16:complement(616526..620566)
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AA seq
655 aa
AA seq
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MADTVQYRLERMVDELDDLEKRGLFTRREIAEIVKQRRKFEYRLKRPSPLKQDYLAYIDY
EIQLDALRRLRKKSVARDLKKKGNKKMKMSVSDFAGVSRIVEIYRLAVLRYKGDIELWFR
YLEFCRERRNGRMKKVLAQLIRFHPKVPGVWIYGAAWEFDHNLNVAAARALMQSGLRVCP
TSEDLWVEYLRMELTYLNKLKARKVALGEDKGTLVRDPRDADEQQWREENEGVFMSLDEE
KGNSNGSNVNIDESERKVDLFREQGLNILWTIYSGAIEALPHSLGLRKRLFEILEATELA
DSEDMHKEILSDMRKDFSEDPEYWDWLARLEMTNSGNIQQKIEGIMSTQLQKAIQIYEEA
LLFVPSSLMFNLYVKFFMDVVAPRREEDQLLGLSKHTEDYISHILSIYEKAETLGCITEE
LACEYVSFYLQVGRLDEGKKLAEKLCRGKLSNSVKLWVLRASLEIRCFTNNTAGPSNADL
QSIFELLRGVLKRVSITEAEDLWITAFKVFAVEKHYFDKLVEMSFTSVVKYGGSDDGFSL
PCAVVNCILQKDGIQQARETYKRFLALPRPGLALYKNCIKLEENLASIGDKVCLENARKI
YESALATHDQNVTLWRDYYAMEVKLGTSETANAVYWRAQKTLENFAAFAASPILS
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccgtgcaataccggctcgagcgcatggtcgacgagctcgatgacttggag
aagcgagggctattcacgcgtcgcgaaatcgctgagattgtgaagcagagacgaaaattc
gagtatagactgaagagaccgagtccactcaagcaggactacttggcgtacatagattac
gagattcagctagacgctcttcgtcgccttcgcaagaaatcggtggcgcgtgatcttaaa
aagaagggaaataaaaaaatgaagatgtcggtttctgattttgctggcgtttcgagaatc
gtcgaaatttataggctagctgtattgagatacaagggagatattgagctgtggtttcgg
tatttggagttttgtagggagcgaaggaatggcagaatgaaaaaggtcctggctcaatta
attaggttccatccaaaggtcccaggagtttggatttatggtgcagcatgggaatttgac
cataacttaaatgttgcagctgctcgtgctctgatgcagagtggtttgagagtgtgccca
acttcagaagatctttgggtagagtatcttcggatggaactcacataccttaacaagtta
aaggcccgaaaggttgcccttggagaggacaaggggactctcgtccgtgatcctagagat
gctgatgagcaacaatggagagaagaaaatgagggtgtttttatgtcactggatgaagaa
aaaggaaatagtaatggatcaaatgttaatattgatgagtcagagaggaaagtggatttg
tttagagaacaaggtttgaacattctttggactatctatagtggggcaattgaagctctt
cctcatagtttgggcctgaggaagcggttatttgagatattggaagcaacagagttggca
gattccgaagacatgcacaaggagatccttagtgatatgaggaaagacttctcggaagat
ccagaatactgggattggcttgctagacttgaaatgactaattctggcaatatacaacag
aagattgaaggtatcatgtcaacacaactacaaaaagcaattcagatttatgaggaagct
ttgctgttcgtgccttcatctcttatgtttaacctatatgtaaagttctttatggatgtt
gttgctcctagaagagaagaagaccaactcttgggattatccaagcatactgaagattac
atctctcatatcttgagtatatatgagaaagctgagacattgggatgcattactgaggaa
cttgcttgtgaatatgtctcattttacttgcaagtagggagactagatgaaggaaagaag
ctagcagaaaaactatgcaggggaaaactttccaattcagtaaaattatgggtattaagg
gcctctttagaaattagatgttttacaaataatacagctggaccaagtaacgctgatcta
caatccatctttgaacttctgagaggcgtgttgaaaagagtatcaataacagaagctgag
gacttatggataacggcattcaaggtttttgctgtagaaaaacattattttgacaagctg
gtggagatgtcgttcacttcagtagttaagtatggcggcagtgatgatggattctcccta
ccatgtgctgttgtaaattgtattcttcagaaggatggtattcagcaagccagagagaca
tataagcggtttcttgccttgccacgtccaggccttgctttatacaaaaattgcatcaag
ttggaagagaaccttgcatctattggtgataaagtttgtcttgaaaatgcccgaaaaata
tatgaatctgcgcttgcaactcatgaccaaaatgtcacattatggcgagattactatgcc
atggaggtcaagctgggaacatcagaaactgcaaatgccgtctattggcgcgcacagaag
acacttgaaaactttgctgcatttgctgcatctccaattttgtcataa
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