Manihot esculenta (cassava): 110603970
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Entry
110603970 CDS
T05761
Name
(RefSeq) serine/arginine-rich splicing factor SR45a isoform X1
KO
K12897
transformer-2 protein
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110603970
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110603970
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110603970
Protein phosphatases and associated proteins [BR:
mesc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110603970
Spliceosome [BR:
mesc03041
]
Common components
Common spliceosomal components
SR proteins
110603970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
110603970
NCBI-ProteinID:
XP_021597672
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All DBs
Position
2:8575781..8578960
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AA seq
233 aa
AA seq
DB search
MLRELINFNSFCLLRRRILLAKGIHSLFPHGENSRGLDQDPIRGPGQGPGPDLDTCPGHG
PVFVADQDPEVVADAINPGNTLYVTGLPTRVTERDLEEHLSKEGKVVSCFLVVEPRTRIS
RDFAFVTMDTVEDANRCVKYLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGIISNGDYGY
HGRNRGYDDYRRSPRRSLYHGGRDYSPRRSPNGGRSKRERSRSPYSPPYRGSR
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgttaagagaactgatcaatttcaattccttttgcttattacgcaggcggattctccta
gcaaaaggaattcacagtctctttccccatggagagaacagtcgaggtctagatcaagac
cccattcgaggtccaggtcaaggtccgggtccagatctagatacatgtcccggccacggt
cccgtattcgtggcagatcaagatccagaagtcgtggcagatgctataaatcctggaaat
acattatatgtgactggtctgcccacaagagtcacagaaagggacctagaagagcatttg
tctaaagagggaaaggttgtatcctgttttcttgttgtggagccgcgtacacgcatttct
cgtgattttgcttttgtaacaatggacactgttgaggatgcaaaccgctgtgttaagtat
ctcaatcaatcagtactggagggcagatatattacagtggagaagtcacggaggaaacga
ccaagaactccaacaccagggcattatcttgggattatcagcaatggggactatggctac
catggtaggaatcgtggctatgatgattatcgtaggtctcccaggcgctcactttatcat
gggggtcgtgattattctcctaggcgctctcccaatggtggaaggtcaaagagagagagg
tccagatcaccctactcgcctccttatcgtggctctaggtga
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