Manihot esculenta (cassava): 110604086
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Entry
110604086 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110604086
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110604086
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
110604086
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_RanBP
POT1
Motif
Other DBs
NCBI-GeneID:
110604086
NCBI-ProteinID:
XP_021597857
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Position
16:complement(638420..641188)
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AA seq
472 aa
AA seq
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MEVLSRCFRKSTSFPFSIPSPCSNRIVFSELLMSWTCKRCTFINSPSSKPTCQICLSPSS
PLPSSSSSPAARQDTPTWSCKACTFLNPYKNSACEICGTRGSLSSLSSFEVLNDVGPDED
LDSSIGSVFVPLRTCKRKISNSFDSGLDCVDSESFRGVKVSNRTVDAKDGDCVKLGGFQG
LGASNKAVTVVKEDTSSSTILSSFKILSYNVWFREDLELHKRMKALGDLIQLHSPHVICF
QEVTPNIYDIFRQSSWWKAYHCSVANEMAYSRPYFCMLLSKLPVKSFSARPFNNSIMGRE
LCIAELEVQPNKPLVVATSHLESPCPAPPTWNQMFSKERVDQAKEAMNLLKKNSNVIFGG
DMNWDDKLDGQFPLSDGWMDAWAELRPGENGWTYDTKSNQMLSGNRTLQKRLDRFVCHLR
DFRISKIDMIGMEAIPGLSHIKEKKVRKEVKMLELPVFPSDHYGLLLTISFQ
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggaagtattgtcccgctgcttccgcaaatcaacctcatttccattctcaatcccatct
ccttgctccaatcgtatcgtcttctccgagctcctcatgtcttggacttgcaagagatgc
actttcatcaactccccatcttcaaaacccacttgtcaaatctgcctatcaccatcgtct
cctcttccttcttcctcgtcttcaccagctgctcgtcaagacaccccaacatggtcctgc
aaagcttgcactttcttgaacccatataagaattctgcctgtgaaatatgtggcactcgg
ggttctctttcttccctttcgagtttcgaggttttgaatgatgttggtcccgatgaggac
ttggattcttctattggttctgtctttgtgcccttgaggacttgcaagaggaagattagt
aactcattcgattctggtttggattgtgttgattccgaaagctttcgtggagttaaggtc
tccaataggactgttgatgcgaaggatggggattgtgttaaattgggtggatttcaaggg
cttggggcatcaaacaaggcggtaactgttgtaaaggaggacaccagttcatctaccatt
ttgagttcattcaagattttgagctacaatgtttggttccgagaggatctggagttgcac
aagagaatgaaagctcttggcgacctgattcaactgcattcaccccacgttatttgtttt
caggaggttactccaaatatatatgacatatttaggcagtctagctggtggaaagcatac
cactgctctgttgcaaatgagatggcatattcaagaccatacttttgcatgctgttgagc
aaactccctgtaaaatccttcagcgctaggccatttaacaactctataatggggagagag
ctttgcattgctgaacttgaagttcagcctaacaagccattggtggttgccacaagccat
cttgaaagtccctgccctgcacctccaacatggaaccagatgttcagcaaggagcgtgta
gatcaggcaaaggaggccatgaaccttctcaagaagaactcaaatgtgatctttggtggg
gacatgaactgggatgacaagttagatggtcagtttcctttatctgatggatggatggat
gcatgggcagagttaagaccaggggaaaatggctggacatatgacaccaagtccaaccag
atgttgtcagggaaccggacattgcaaaagcgacttgatagatttgtgtgccatctacgt
gattttagaattagtaaaattgacatgattggtatggaagcaataccaggtttatcacat
atcaaggagaagaaagtgaggaaagaggtaaagatgctggagctccccgtgtttcctagt
gatcattatggcttgcttctaacaatttctttccagtaa
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