Manihot esculenta (cassava): 110604375
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Entry
110604375 CDS
T05761
Name
(RefSeq) auxin response factor 6
KO
K14486
auxin response factor
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110604375
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Ortholog
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GFIT
Motif
Pfam:
ARF_AD
B3
BRWD_AD
AUX_IAA
At5g26805_C
Motif
Other DBs
NCBI-GeneID:
110604375
NCBI-ProteinID:
XP_021598206
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Position
17:complement(27441977..27449286)
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AA seq
905 aa
AA seq
DB search
MRLSSVGFNPQTQEGEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKE
VDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGAPS
KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR
HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRTNRPQTVMPSSVL
SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYFKAVYHTRVSVGMRFRM
LFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
TFPMYPSPFPLRLKRPWPPGLPSFHGIKDDDFGMNSPLMWLRGDGDRGIQSMSFQGLGVT
PWMQPRVDASMLGLQTDMYQAMAAAALQEMRAIDPSKSSTTSLLQFQQHPNLPSRTAALM
QPQMLQQPQSQQAFLQGVQENQHQPRTQVQTQSHLVQQQLHSQHSLNGPQQQPQQQQQHP
LSQQQLVEHQQIPNVVSAMSQFASASQSQSPPLPAISSLCQQQSFSDSNGNPVTSSVVSP
MHSLIGSFSQDESTHLINLPRTSALITSSAWPSKRAAVEPLISSGAPQCVLSQVEQLGGP
QTNISQSSVSLPPFPGRECSIDQEGGTDPQSHLLFGFNIEPSSLQLQSGMSSLRGVGSDC
DSTTIPFSSSNYMSTTGTDFSLNPAMTPSSCIDESGFLQSPENVGQVNPPTRTFVKVYKS
GSFGRSLDITKFSSYNELRSELARMFGLEGQLEDPLRSGWQLVFVDRENDVLLLGDDPWP
EFVNSVWCIKILSPQEVQQMGKRGLELLNSVPIQRLSNGSCDDYASRQDSRNLSTGITSV
GSLDY
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaggttatcttcagttggttttaatccacagacccaggaaggggagaaacgggttttg
aattctgaactttggcacgcatgtgcgggtcctctggtttctctgcctgctgttggaagt
cgtgttgtttatttcccgcagggccacagtgagcaggttgctgtgtcaaccaacaaagaa
gtggatgcccatatccctaactacccaagcttacctccgcaacttatatgtcagcttcac
aatgtgaccatgcatgcagatgttgagacagatgaagtgtatgcacagatgaccttgcag
cctctgagtcctcaagagcagaaggatgcctaccttccagcggaattgggcgcccccagc
aaacagccgacaaattatttttgtaaaactttgacagctagtgacacaagtacgcatgga
ggattctctgtccctcgccgggctgctgaaaaagtgtttcctccactggacttttcacag
caacccccagctcaagagttgattgccagggatctacatgataatgaatggaaattcagg
catatctttcgaggccagcccaaaagacatttacttacaactggttggagtgtgtttgta
agcgctaaaagacttgtggctggggattcagtcctttttatctggaatgaaaagaatcaa
ttgttgcttggtatccgacgtactaatcgtcctcaaactgtgatgccttcatcagtctta
tcaagtgacagcatgcacttagggcttcttgctgctgcggctcatgcagctgcaacaaac
agccgtttcactatattctacaacccaagggctagcccatcagagtttgtcataccattg
gccaagtactttaaagcagtctatcatacccgggtttctgttggtatgcgctttaggatg
ctatttgaaacagaagaatcaagtgtccgtcgttacatgggtacaataactggcataagt
gacttggatcctgtaaggtggcctaattcacattggcgctcagtcaaggttggctgggat
gagtccacagctggagagaggcaaccaagagtttctctatgggaaattgaaccattaaca
acattcccaatgtatccatctccattccctttaaggcttaagcgcccttggccacctgga
ctgccctcattccatggaatcaaggatgacgattttggaatgaattctccccttatgtgg
ctgcgaggagatggagatcgcgggattcaatctatgagctttcagggactaggagtaaca
ccatggatgcagccaagggtcgatgcttctatgcttggtttgcaaactgacatgtaccaa
gctatggctgctgctgccctccaggagatgagggctattgatccttccaaatcatcaact
acatcccttttgcaattccagcaacatcctaacctccccagcaggactgctgcattgatg
cagccccagatgttgcagcagcctcaatctcaacaggcctttcttcaaggtgttcaagaa
aatcaacatcagcctcggactcaggtccaaacacagtcacacctagttcagcaacagttg
cattctcagcactcactaaatggtccacagcaacagccgcagcagcaacaacagcatcct
ctgtcacaacagcaactcgttgagcatcagcagattccaaatgtcgtctctgcaatgtct
caatttgcttcagcctctcaatcccagtcaccaccattgcccgccatctcttctctgtgc
cagcagcagagtttctccgattcaaatgggaaccctgtgacaagctctgttgtttctcct
atgcatagtctcattggttcattttcccaggatgaatcaactcatttgatcaacctgcct
agaacaagtgccttgataacttcttctgcctggccatctaagcgagctgcagttgaacct
cttatttcttcaggagctccacaatgcgttctgtcccaagtggaacagttggggggccct
cagacaaacatatctcagagttctgtttcattacctcccttccctggtagagagtgttca
atagaccaagaaggtggcactgatccacaaagccatcttctatttggttttaatatagag
ccttcatctcttcaattgcagagtggaatgtccagtcttaggggagttggcagtgattgt
gattccacaactattccattctcttcttcaaattacatgagtactacaggcactgatttt
tcgcttaacccagcaatgacaccgtcgagttgcattgatgaatcaggtttcctgcagtcc
ccagagaatgtgggccaagtaaacccaccaactagaacctttgttaaggtttacaagtcg
gggtccttcggtaggtcgctggacattaccaaattcagcagttacaatgagttacggagt
gaactggctcgtatgtttggccttgaaggccagctggaggaccctttgagatcaggctgg
cagcttgtatttgttgaccgggagaatgatgttctcctcctcggtgatgacccctggccg
gaatttgtaaacagcgtgtggtgcatcaaaatactctcaccacaagaagtgcagcaaatg
ggcaaacgtggtctagagcttctgaattcagtcccaattcagaggctttctaatggcagt
tgtgatgattatgcaagccggcaggactcaagaaatttgagcaccggtataacttctgtg
gggtctttggactactga
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