Manihot esculenta (cassava): 110604385
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Entry
110604385 CDS
T05761
Name
(RefSeq) SAGA-associated factor 11 isoform X2
KO
K11363
SAGA-associated factor 11
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110604385
03036 Chromosome and associated proteins [BR:
mesc03036
]
110604385
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110604385
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
110604385
SLIK complex
110604385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sgf11
Motif
Other DBs
NCBI-GeneID:
110604385
NCBI-ProteinID:
XP_021598218
LinkDB
All DBs
Position
17:2488723..2491669
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AA seq
178 aa
AA seq
DB search
MSGPNEDNLSPHTQLSSHFFGDLLDSIIVDVASECHRIAKLGLDRNLEEEEEELRLSTQA
RVRVADPSNSGETNSKYVVDIFGQTHPPVANEIFECMNCGRSIMAGRFAPHLEKCMGKGR
KARLKATRSSTAAQNRYSRGSPVSTYSPHSNSSSTNRLSNGTPGIAGEEYSNGTLEEP
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcccaaacgaagataacctgtctcctcatacccagctttcatctcattttttt
ggggacctcctcgattcaattattgttgatgttgcctctgagtgtcaccggatagcaaaa
ctgggactcgatcgcaacttggaggaagaggaagaagaattaagattatcaacacaagcc
cgtgtaagggtagctgatcctagtaatagtggtgaaacaaatagcaagtatgtggtcgac
atttttggacaaacccatccacctgttgcaaatgaaatatttgagtgcatgaattgtggg
cgatcaatcatggctggaaggtttgctcctcatttggaaaagtgcatgggaaagggtagg
aaggctcgactcaaggcaaccagaagtagcacagctgcccagaaccggtattcacgaggc
agccctgtttccacatactctcctcattcaaattcctccagcacaaatcggttatcaaat
ggaacacctggaattgcaggtgaagagtattcaaatggcacattggaggagccatga
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integrated database retrieval system
