Manihot esculenta (cassava): 110604388
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Entry
110604388 CDS
T05761
Name
(RefSeq) chloride channel protein CLC-b isoform X1
KO
K05016
chloride channel 7
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
110604388
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110604388
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110604388
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mesc04040
]
110604388
Protein phosphatases and associated proteins [BR:
mesc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110604388
Membrane trafficking [BR:
mesc04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
110604388
Ion channels [BR:
mesc04040
]
Chloride channels
Chloride channel (CLC)
110604388
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
110604388
NCBI-ProteinID:
XP_021598221
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All DBs
Position
17:31134540..31137589
Genome browser
AA seq
788 aa
AA seq
DB search
MKGNSSQLASEAIAPPHNMEAGEDERDPESNDSLQHPLLKRSITLSSNPLALVGAKVSHI
ESLDYEINENDFFKHDWRSRSKVQVLQYIFMKWTLAFLVGLLTGLIATLINLAIENIAGY
KLLAVFQFIENERYLTGLAYFAGANLILTGFASVLCVCFAPTAAGPGIPEIKAYLNGIDT
PDMFGVSTLIVKIFGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRVKWRWLRY
FNNDRDLRDIITCGASSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVVVVL
RGFIELCNSGKCGLFGRGGLIMFDVSNVTVTYQAMDIIPVIIIGILGGVLGSIYNYLLHK
VLRVYNLINQKGRMPKLLLSLTVSIFTSVCLYCLPFLARCQPCDPSTTEPCPTNGRSGNF
KQFNCAKGYYNDLATLLLTTNDDAVRNIFSSNTPKEFQPVSLLIFFAVYCVLGLFTFGIA
VPSGLFLPMILMGSAYGRLLGVIMGSYTNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLE
LTNNLLLLPITMIVLLIAKTVGDSFNPSVYDIILHLKGLPFLDANPEPWMRNLTVGELAN
AKSPLVTLSGVEKVSRIVDVLKNTTHNGFPVVDEEVVPPVGQATGATELHGLILRAHLVQ
ALKKKWFLKEKRRTEEWEVREKFTWVELAEREGKIEEVAVTMDEMEMYVDLHPLTNTTPY
TVVESISLAKALVLFRQVGLRHLLIVPKYEAAGVSPVVGMLTRQDLRAYNILSAFPHLVR
SDCREKQN
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaaattcaagccaattggcctctgaagcaatagcaccaccccacaacatggaa
gctggtgaagatgaaagagacccagaaagcaatgattctctccaacacccactcctcaag
agaagcataactctatcttccaatccattagccctggttggagctaaagtctctcacata
gagagcttggattatgagatcaacgagaatgattttttcaagcatgattggagaagcaga
tccaaagttcaagttctgcaatatattttcatgaaatggacacttgcctttctcgttgga
cttctcactggtttaattgccacccttatcaatcttgcaattgagaacattgctggctat
aagcttcttgctgtttttcaattcatagagaatgaaaggtatttaacagggttagcttat
tttgctggagctaatcttattttaactgggtttgcttctgttttgtgtgtgtgctttgca
cccacagcagcagggcctggcatccctgaaatcaaagcttatcttaatggaattgatact
cccgacatgtttggggtctcaacgttgattgttaagatatttggaagcattggagctgtt
gctgctggtctagatttagggaaagaaggaccattggtacacattggcagctgcattgct
tccctattaggccaagggggacctgataattaccgtgtcaagtggcgatggcttcgttac
tttaacaacgacagggatctccgggacatcatcacttgtggtgcttcgtcaggtgtttgt
gcagccttccgagctccggtgggtggtgtgttgttttctcttgaggaggtagcaacttgg
tggaggagtgcacttctctggagaactttctttagcacagccgttgtggtggtggtgctc
aggggttttatagaactctgcaattcaggaaagtgtggactttttggaagaggagggctg
atcatgtttgatgtgagcaatgttactgtgacttatcaggcgatggatatcatcccagtg
atcataattggcatacttggtggagttctggggagcatctacaactaccttcttcacaag
gtcctcagagtctataatctcatcaaccagaagggaagaatgcccaagctactcctcagt
ttaacagtttcaatttttacctcagtgtgcctgtattgcctcccatttcttgccagatgc
cagccttgtgatccctccacaacagagccatgtcctaccaatggacgttctggcaacttc
aagcaattcaactgtgctaagggctattacaatgatcttgctacacttcttcttaccaca
aatgatgatgctgtccgaaacatcttctcttccaacactccaaaagaatttcagcctgtg
tctctcttaattttctttgcagtttattgcgttttaggactatttacctttggcattgca
gtaccctcaggtctcttcctccctatgatacttatggggtcagcttatggccgtctgctt
ggtgttatcatgggttcctataccaatattgaccaggggctttatgcagttcttggtgca
gcttcgctcatggctggctcgatgaggatgactgtttcactctgtgtaatttttcttgaa
cttacaaacaaccttttattacttcccataacaatgattgtcctcctgatagcaaaaaca
gtaggagacagcttcaatccaagtgtttatgatattatactgcacctaaaaggcctacct
ttcttggacgcaaatcctgagccatggatgagaaatctcaccgtgggcgagcttgctaat
gccaaatcaccactggttactctttctggagtggagaaggtttcccggattgtagatgtc
cttaaaaacaccacgcacaatgggttccctgtggtggacgaggaggtggtaccgcctgtt
gggcaagccacaggggcaacagaattgcatggattaatcctgcgagctcaccttgttcaa
gcgctcaagaagaagtggttcctgaaggagaagaggagaacagaggagtgggaagtaaga
gagaaatttacgtgggttgagttggctgagagggaagggaagattgaagaggttgcagtg
acaatggatgaaatggaaatgtatgttgatctgcatcctctcaccaatacaacaccgtac
acggttgtagagagcatttcattggcaaaagctctggtgcttttcaggcaagtagggctt
cgccacttgctcattgttcccaaatatgaagctgccggcgtgtctccggtggtcggaatg
ttgactcggcaggatttaagggcatacaacatcttgagtgcctttcctcatttggtcaga
tcagattgcagagaaaagcagaactaa
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