Manihot esculenta (cassava): 110604434
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Entry
110604434 CDS
T05761
Name
(RefSeq) AP-4 complex subunit epsilon
KO
K12400
AP-4 complex subunit epsilon-1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110604434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110604434
Membrane trafficking [BR:
mesc04131
]
Endosome - Golgi transport
Others
AP-4 complex
110604434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
INTS1_R4
HEAT
HEAT_EZ
PDS5
TOR1L1_N
NPHI_C
HEAT_EF3_N
Cnd3
Zincin_1
Motif
Other DBs
NCBI-GeneID:
110604434
NCBI-ProteinID:
XP_021598283
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All DBs
Position
17:1543554..1557870
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AA seq
976 aa
AA seq
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MEQLKTIGRELAMGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLSEIETLKRRIVEPD
IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHNDNLLLKRTGYLAVTLFLNEDHDLI
ILIVNTIQKDLKSDNYLIVCAALNAVCKLINEETIPAVLPQVVELLGHSKEAVRKKAIMA
LHRFYQKSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLFDLITTDVSSYKDLVVSFVSIL
KQVAERRLPKSYDYHQMPAPFIQIKLLKILALLGSGDKQASEHMYTVVGDIFRKCDSSSN
IGNAVLYECISCVSSIYPNPKLLEAAADVIARFLKSDSHNLKYMGIDALGRLIKLSPEIA
EQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIDYMININDSHSKTEIAS
RCVELAEQFAPSNIWFIQAMNRVFEHAGDLVKSKVAHNLMHLIAEGFGEDDDTADSQLRS
SAVESYLRIVGEPKLPSVFLQVICWVLGEYGTADGKFSASYVAGKLCDVADAYSNDETVK
AYAVTALMKLFAFEIAAGRKMDILPECQSLIEELSASHSTDLQQRVYELQAVIGLDAHAV
ECILPSDASCEDIEIDKSLSFLDDYVQRSLEKGAQPYIPESERSEMLDIPNFRSQVQHEA
STHGLRFEAYELPVPSRTTPVSLAPSTELVPVPEPSYDREVRQAATVPSSSNSGSSELKL
RLDGVQKKWGRPTYSSATSTSNSSLQNTANEGTHVDGSGNVNSKAREASYDARKTQVDIP
PEKQKLAASLFGGSSKSERRVSSPGHRLPKGSSHVLKSAAVSTTDAVVEKTTPVQPPPDL
LDLGEPTGKEGRSSVDPFKQLEGLLGPTQHKSSANPGIVVSTSAPDIMQLYSDAPASGQS
GGFMYSLSSNRSDDNLVAAFANATTNSAQSTTTATHPTQFSRGPNLKDSLEKDALVRQMG
VTPTGQNPNLFKDLLG
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggagcaactcaagaccataggaagggagctcgccatgggctcacaaggcggctttggc
caatctaaagaattcctcgatctcgtcaaatcaatcggcgaggctcgatccaaggccgag
gaggaccgaattgttcttagcgagatcgaaaccctcaaacgacgtatcgttgagcctgac
atccctaagcggaagatgaaggagtacatcatccgtcttgtctatgtcgagatgctcggc
cacgatgcttccttcggatacatacacgccgttaaaatgacccacaatgacaatttgctc
ctcaagcgaactgggtatcttgctgtcacgctttttctcaatgaggatcatgatttgatc
atcttgatagttaataccattcagaaggacttgaaatcggataattatttgattgtgtgt
gccgccttgaatgcggtttgtaagttgatcaatgaggagactattcctgccgtgctcccg
caggtggtggagttgttggggcattctaaggaggctgttcggaagaaggcgattatggct
cttcatcgcttttatcaaaagtccccttcttccgtttctcatctcgtttcaaattttcgc
aagaggctttgtgataatgatcctggagtcatgggtgcaacactttgtccactttttgat
ctaataactacagatgttagttcttataaagatttagttgtaagctttgtaagcattctc
aaacaagtagccgagcgtagattgccaaagagttacgattatcatcagatgccagctcca
tttatacagatcaagttgctgaaaatcttggcattgctaggaagtggtgataagcaagca
agcgagcacatgtatactgttgtgggtgacatatttaggaagtgtgattcatcgagtaac
ataggaaatgctgtactttatgagtgcatatcctgtgtctcttcaatatatcccaatcct
aagctgctagaagctgctgcagatgtaatagcaagattcttgaagagtgatagtcataat
ttgaaatatatgggcattgatgcgctaggtcgattgataaaattaagtccagagattgct
gaacaacaccagttggctgtgatagactgcctagaggacccagatgatactctaaagcga
aaaacgtttgaattgctttataagatgacgaagtcctccaatgtcgaagtgattgttgac
cgaatgattgattacatgatcaatatcaacgatagtcattccaaaactgaaatagcatct
cgatgtgtcgaacttgcagagcaatttgcacctagcaacatctggtttattcaggccatg
aatagagtctttgagcacgcaggagacctagtgaaaagtaaggtggctcataacttgatg
cacttaattgctgagggatttggggaggatgatgatactgcagatagtcaattaagatct
tcagctgtggagtcatatttacgtattgttggggagccaaagcttccatctgtattcctt
caagtcatttgttgggtcttgggggaatacggaactgctgatggaaaattttctgcttca
tatgttgctgggaagttatgtgatgtggcggatgcatactcaaatgatgaaactgttaag
gcatatgcagttaccgccctcatgaaactatttgcatttgaaatagctgctggaagaaaa
atggatattttacctgagtgtcaatctttgattgaggaattatcagcttcccactcaaca
gacttgcagcagcgcgtatatgaacttcaagcagttattggcttggatgctcatgcagtt
gaatgtattctgccatcagatgcgagctgtgaagatattgagattgataaaagcctctct
ttccttgatgattatgttcaacgatctctagaaaaaggagctcagccttatattccagaa
agtgaacgctctgagatgttagatatccccaatttcaggagccaagttcagcatgaagct
tcaactcatggtcttaggtttgaggcttatgagcttccggtgccatctaggacaactcca
gtatcacttgcaccatcaacagaacttgttccagttccggagccatcttatgatagggag
gtccgacaggcagctaccgtgccatcctcatctaattctggatcatcagaactcaagcta
cgacttgatggagtccaaaagaagtggggtaggccaacttacagttctgcaacatctacc
tcaaattccagtttgcagaatactgcaaatgagggtactcatgttgatgggtcgggcaat
gtaaactcaaaagcacgtgaagcctcttatgacgcaaggaagacacaagttgatatcccg
ccagaaaagcagaagcttgctgcatctctttttggaggttcatcaaaatctgagagaagg
gtgtcttcaccaggccataggcttcccaagggaagcagccatgttttgaagtcggcagct
gtatctaccactgatgctgtagtagagaagacaactcctgttcaaccacctccagacttg
cttgacctgggtgaaccaaccggtaaagaaggccgttcatcagttgatccatttaagcaa
ttggaagggctgcttggcccaacacaacacaagtcaagtgctaatcctggcattgttgtt
tccactagcgcacctgatattatgcaattatattcagacgcacctgcaagtgggcagagt
ggtggtttcatgtattctttgtcatctaataggagtgatgacaatcttgtcgctgcattt
gcgaatgctactaccaactctgctcagagtacaactacagctacgcaccccactcaattt
agtagaggtccaaatcttaaggattcattggaaaaggatgcacttgtgaggcagatgggc
gtcacccctaccggtcaaaatcccaacttattcaaagatttgttaggttga
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