Manihot esculenta (cassava): 110604440
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Entry
110604440 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110604440 isoform X1
KO
K17925
sorting nexin-13
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mesc04990
]
110604440
Domain-containing proteins not elsewhere classified [BR:
mesc04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
110604440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
110604440
NCBI-ProteinID:
XP_021598288
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All DBs
Position
17:30361640..30374109
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AA seq
1046 aa
AA seq
DB search
MKAMETIQDLIEEAKVRLVWWGLCIFAVTYFLSHTSSSMWINLPISILLVSAFRILSNEV
EFSWKSCRLTRPQSYLSHLEKKQLSVNDSRLSSAPLPQRWKRKIDSPVVEAAINDLIDKI
LKDFVIDLWYSEITPDKEAPELMRAVIMDAIGEISGRVKEINLVDLLTRDIIDLIGDHLD
LFRRNQAAIGADVMGTLSTDERDERLKHHLLASKELHPALISPENEFKVLQRLTGGLLAV
VLRPRESQCPLVRTIARELVTCLILQPVMGLASPLYINEIIEYVLLATKDGNLMEVSSNP
YAGSVHNGGSSSGKYSSLNSEKTNIVDTEKKFQGTDMNLVKINDCKETLLDCHSNQQELL
QPRHAGWARVLEAATQRRTEVLTPENLENMWSKGRNYKKKETKNLQSGAKGSVTNNKEPT
RNSGKEILTNSIAISAGSKEKAIVWQTPQLSHDALSRVVNKDVKQFTQDHNVESSIERGH
ASDESDSNSNPSVNENKSRHKRSYSTSALKSQPVEEKPFTGDVRVSAISEFSSADYGRPS
ENLAVKKVSDVAISSAGPRIPNPKLKCRVMGAYFEKLGSKSFAVYSIAVTDAEKRTWFVK
RSRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQNLLSIANVA
EQHEVWDFLSVSSKNYSFGKSSSVMRTLAVNVDDAVDDILRQFKGASDGLMRKVVGLPPL
PDETDSSIYSRNLSWHAGEINNPVARQDTSETVNSFSDSEESFYQGSQEASVEQANGWHS
DNELNSKGSPPQVIKHDKDSFSAQMKHSPESKSEWVNQGGLHAVNSAAATSNHMEDPVGM
PPEWTPPNVSVPLLNLVDKVFQLNRRGWLRRQVFWMSKQILQLIMEDAIDDWLLRQIHWL
RREDIVAQGIRWVQDVLWPDGTFFTRIGVMQGAIHDAQFNMVPFEVSQVGGSKASKQSSF
EEQLEASRRASDIKKILFDGAPAALVSLIGNKQYKRCARDIFYFTQSTICVKQLAYSILE
LLLISVFPELRDLVLDVHGKMHVTLA
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctatggagacgattcaggatctgatcgaggaggctaaggttcggctggtttgg
tgggggctctgtatctttgccgtcacttacttcttatctcatacaagttcttcaatgtgg
ataaatctacctatatcaattcttttggtttctgcattccgcattttgtcaaatgaagtg
gagttcagctggaaatcttgtcggttgacccgtccacaatcttatttgtctcatttggag
aagaaacaactttctgttaatgattcacgactttcttctgcacctctccctcaacggtgg
aaaagaaaaattgattctccagttgtggaggctgcaatcaacgatctcattgataaaatt
ttgaaggattttgtaatagatttgtggtattcagaaattacgccagacaaggaggcacct
gagttaatgcgtgctgtgatcatggatgctattggtgaaatatcaggaagggttaaggaa
ataaaccttgttgacctgctaacaagggatataattgatttaataggggatcacttggat
ctttttagacgaaatcaagctgcaataggtgctgatgtaatgggaacactttctactgat
gagagagatgaaaggttgaagcaccatctattggcttctaaggagcttcatcctgcacta
atatctcctgagaatgagttcaaggttctgcagcgcctaactggtggacttttagctgta
gtgctgagacctcgagagtctcaatgccccctggttcggactattgctcgagagcttgtg
acgtgcttgatattgcagcctgttatgggtcttgcaagccctttgtatatcaatgagatc
attgaatatgttttgcttgccactaaagatggtaacctaatggaggtaagcagtaatcca
tatgccggatccgtacataatggtggttcttcctctggaaaatattcatccttaaatagt
gaaaaaactaacattgttgatactgaaaagaagtttcaagggactgacatgaatttggtt
aaaatcaatgattgtaaagaaacactgttggattgccactcaaatcagcaagagcttttg
cagccacgtcatgcagggtgggcacgtgtactagaggctgcaacccagagaagaactgaa
gtgcttacgcctgaaaatcttgaaaacatgtggtcaaaaggacggaattataaaaagaaa
gagaccaaaaaccttcaatcaggggcaaagggttcagtgacaaataacaaagagcctacc
agaaattcagggaaggaaattttaacaaatagcattgcgatttctgctggatcaaaggaa
aaagctatagtgtggcaaacacctcaattaagtcatgatgctttatcaagagttgtgaat
aaagatgtgaaacagttcactcaggatcacaatgtggagtcttctatagagagaggacat
gccagtgatgaatcggatagcaatagtaatccctctgtgaatgaaaataaaagtaggcat
aaaagatcctatagcacttctgctctgaaatcccagcctgttgaagaaaagccatttaca
ggagatgttagagtgtctgctatttcagagttcagtagcgcagattatggtaggcctagt
gaaaatctggctgttaagaaggtctcagatgtagcaattagcagtgctggaccccgtatt
cctaatcctaagttgaagtgccgggttatgggagcatattttgagaaactcgggtccaaa
tcttttgcagtttattcgattgcagtgacagatgctgaaaagagaacttggtttgtgaaa
cgaagcagatacaggaattttgagagattgcatcggcatcttaaggacattcctaattac
acattacatttgcctcccaaaaggatattctcatcaagcacagaggatgcctttgttcat
caacgttgcatacagcttgataaatatttgcaaaaccttttatctatagctaatgttgcc
gaacagcatgaagtgtgggatttcctaagtgtttcctccaagaattactcctttgggaaa
tcttcatcagttatgagaactctggcagtcaatgtggatgatgctgtggatgatattttg
cgccaatttaaaggggcttcagatggcttaatgcgcaaagttgttggtttgcctcccctc
cctgatgaaactgattcttcaatctacagcaggaatctgtcatggcatgcaggtgagatt
aataatcctgttgcaaggcaggacacatcagaaactgtgaacagcttttctgatagtgaa
gagagtttctatcaaggaagtcaggaagcatccgttgagcaagctaatggttggcattca
gataatgaattaaattccaagggctctccacctcaagtaataaaacatgataaggattct
ttcagtgcacagatgaaacacagtccagagtcaaaatctgagtgggttaatcagggtggg
cttcatgcagtgaattctgcagcagcaacttccaatcatatggaggatcctgttggaatg
ccacctgagtggactccaccaaatgtaagtgtacctcttctaaatctagttgataaggta
ttccagctcaatagaagaggctggctaagaagacaagtcttttggatgtcaaagcaaata
ctacagttgataatggaagatgctattgatgattggctcttgaggcagattcattggctt
cgtagagaggacatcgttgctcaagggattcgttgggtgcaagatgttctctggccggat
gggacattctttacaagaatcggggttatgcaaggcgctattcatgatgcacaattcaat
atggttcctttcgaggttagccaggtgggtggaagcaaggcctctaaacaaagttctttt
gaagagcagcttgaggcttctcgtagagcaagtgatataaaaaagatactctttgatgga
gctccggcagccttggttagcttgattgggaacaagcagtacaaacggtgtgcaagagat
attttctatttcacacagtctactatatgtgtgaagcaacttgcgtattcaatacttgaa
ctattactcatatcagttttccctgagcttcgagatcttgtgctggatgttcatgggaag
atgcatgttacgcttgcttag
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