Manihot esculenta (cassava): 110604541
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Entry
110604541 CDS
T05761
Name
(RefSeq) nuclear pore complex protein NUP155 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110604541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110604541
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110604541
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
110604541
NCBI-ProteinID:
XP_021598437
LinkDB
All DBs
Position
17:complement(29036158..29047386)
Genome browser
AA seq
1493 aa
AA seq
DB search
MPWEEDIVLRDVTNAGLVVSDRIGREVASQLDLEEALEASRYASHPYSTHPREWPPLIEL
VDTWELPPVLIERYNAAGGEGTALCGIFPEIRRAWASVDNFLFLWRFDKWDGQCPEYSGK
EQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSSGGDGTDPYAEVSLQPLPE
YTVPSDGVTMTCITCTDKGRIFLAGRDGHIYELHYTTGSGWHKRCRKVCLTAGLGSVISR
WVVPNVFKFGAVDPIVEMVFDNERQILYARTEEMKLQVFLLGPNGDGPLKKVAEERNLFS
HRDVHYGGRQSTGPRAPNRSVKPSIVCISPLSTLESKWLHLVAVLSDGRRMYLSTSPSTG
SNGTVGGLGRLNITHQRPNCLKVVTTRPSPPIGVSGGLTFGAISLASRTPNEDLTIKVET
AYHSAGTLVLSDSSPPTMSSLVIVTKDSSSQSGTLGTSTRSSRALRELVSSLPIEGRMLF
VADVLPLPDTAATVQSLYSEVEFFGFESLGESCEKASGRLWAKGDLFTQHILPRRKIVVF
STMGMMEVVFNRPVDILRRLFEANSPRSILEDFFNRFGAGEAAAMCLLLAARIVHSETLI
SNAVAEKAAETYEDPRVVGMPQLEGFNALSNTRTTTGGFSMGQVVQEAEPVFSGAHEGLC
LCTSRLLFPLWELPVFVTRGGLGSSDVTSESGVVTCRLSVGALQILENKVRSLEKFLRSR
RNQRRGLYGCVAGLGDVTGSILYGTGSDLGSGDRNMVRNLFGAHSRNIESTAGVTASKRQ
RLPYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLISQHHVARLVQGFDANLLQALVQL
TFHQLVCSEEGDRIATMLISALMEYYTGPDGRGTVDDVSGRLREGCPSYFKESDYKFFLA
VECLERAAVTSDPVEKDNLAREAFNFLSKVPESADLRTVCKRFEDLRFYEAVVCLPLQKA
QAFDPAGDAFNDQIDESIREHAIAQREQCYEIITSALRSLKGESSQREFGSPVRPAAMRP
VLDQASRKKYICQIVQLGIQSPDRLFHEYLYRTMIELGLEDELLEYGGPDLVPFLQNAGR
EPLQEVRAVSKISTTSPFGHSKASITSTQAKYFDLLARYYVLKRQHMLAAHILLRLAERR
STDARDVPSLEQRRQYLSNAVLQAKNASDSGGLVGSTRGAGALDSGLLDLLEGKLVVLRF
QIKIKEELEAIASVLQSSSSMSEPIQDGSVADNNANVEYAKVAQEKANELSLDLKSITQL
YNEYAVPFELWEVCLEMLYFANYSGDADSSIVRETWARLMDKALSSGGIAEACSVLKRVG
SHIYPGDGAVLPLDTLCLHLEKAALERLESGVESVGDEDVARALLAACKGATEPVLNAYD
QLLSNGAILPSPNLRLRLLRSVLVVLREWAMSVFAQRMGTTTSGASLILGGTFSQEQTTV
INQGIRDKITSAANRYMTEVRRLPLPQSKTEAVYRGFRELEESLISPFSFDRF
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgggaagaggatattgtgctccgagacgtgacgaatgctggtctcgtcgtgagc
gaccgcattgggcgggaggttgcttctcagcttgaccttgaagaggcccttgaagcttcc
agatatgccagtcatccctattctactcaccccagagagtggcctcctttaattgagttg
gtggatacttgggagttgccccctgtactcatcgaaagatacaatgcagctggtggagaa
gggacggctttatgtggaatatttcctgagatacgcagggcatgggcatcggttgataat
ttcctatttctatggagatttgataagtgggatggacagtgtcctgaatacagtgggaag
gagcaagccatttgtgctgtaggccttgccaaatctaaacctggtgtttttgttgaagct
attcagtatcttttagttttagccactcctgttgagctgattcttgtaggagtatgctgt
tctagtgggggtgatggtactgatccatatgcagaagtttcactacagcctttgccggag
tacacagtcccatctgatggggttactatgacttgtattacatgtactgataaaggtcgt
atcttcttggctgggcgtgatggtcatatttatgagttgcattacacaactggttctggt
tggcataaaagatgtcgaaaggtttgtctcactgcaggattgggtagtgtcatctcaagg
tgggttgtaccaaatgtatttaagtttggagctgttgatcctattgttgaaatggttttt
gataatgaaaggcagattctgtatgcaagaactgaagagatgaaacttcaggttttcctt
ctaggaccaaacggagatgggccattgaagaaagtggcagaagaaagaaatttgtttagt
cacagggatgtacattatggaggtagacagtcaacaggaccaagagccccaaacagatct
gtgaagccatctattgtttgcatctcacccttatccacactggagtctaagtggttgcac
cttgttgctgtattatcagatggcagaaggatgtacctttccacttctccatctactggc
agtaatggcactgttggaggtttgggacgactcaatattactcatcagagaccaaactgt
ttaaaagttgtaacaactagaccttctcctcctataggggtcagtggtggactcactttt
ggagccatatctcttgccagtagaactccaaatgaggatctcacaataaaggttgaaaca
gcatatcattctgctggaactcttgtcctgtctgattcctcaccaccaaccatgtcttct
ctagttattgtgactaaggactcaagttcacaatcaggtactttaggaacaagcacaagg
agttctcgagctttacgagaacttgtgtcttccctacctattgagggtcgaatgcttttt
gtggcagatgtcctgcccttaccagatacagctgccactgtgcagtcattatattcagaa
gtagaattttttggatttgaaagtttaggggagtcctgtgaaaaggcatctggaagactt
tgggctaaaggtgacctttttacacagcatatacttccaaggcggaaaattgttgttttt
agtactatgggaatgatggaagtagtgtttaataggcctgttgacattctgcgaaggctg
tttgaggctaactcacctagatcgatcttggaagatttcttcaatcgttttggtgctggt
gaggcagctgcaatgtgcttattattagctgcgaggatagttcattctgagactcttata
agcaatgctgttgctgagaaggcagcagaaacatatgaggatccaagagttgttggaatg
ccacaacttgaagggttcaatgcactatcaaacactagaacgacaacagggggttttagc
atggggcaggttgttcaggaggcagagcctgtattttcaggcgcacatgaagggctttgc
ttgtgcacatcaagattactgttccctctctgggaactccctgtgtttgttaccagaggg
ggattgggttcatctgatgtgacatccgaaagtggagtagtaacatgcagactctctgtt
ggggctctgcaaatccttgaaaataaggttcgttctttagagaagttcttaaggtccaga
agaaatcagagaagggggctttatggctgtgtggctggtttaggagacgtgaccggttct
atattgtatggaactggttcagacctaggtagtggtgacagaaatatggtgaggaacttg
tttggtgcccattcacggaacattgagtctactgctggtgttacagcaagtaaacggcaa
cgattaccttatagtcctgcagaattggctgccatggaggtcagagcaatggagtgtatc
aggcagttgcttcttagatctggtgaagcattgtttcttctacagcttatttcgcagcat
cacgtggcacgcttggttcaggggtttgatgcaaatttactacaagcactggttcaatta
acattccatcaactagtttgttctgaggaaggagaccgcattgctacaatgctaatatct
gcactaatggagtattatactggtcctgatggcagaggaacagtagatgatgttagtggt
agattacgggaaggttgtccaagctatttcaaggagtcagattacaagtttttcttggct
gtggaatgtcttgaaagagctgctgtaacttcagaccctgtggagaaggataatcttgct
agagaggccttcaattttttgagtaaagttccagagtctgctgatttaagaactgtttgc
aaaaggtttgaggacttgagattttatgaagctgtggtatgcttgcctctgcagaaagcc
caggcttttgatcctgctggtgatgctttcaatgatcaaattgatgaatctattagagaa
catgcaattgctcaacgtgaacagtgctatgagataattactagtgcattacgttctctt
aagggtgaatcttcacaaagggagtttggatctccagtaaggcctgctgccatgcgacca
gtgcttgatcaggcttctcggaagaaatatatctgccaaattgttcaacttggtattcaa
tcacctgacagactctttcatgagtatctgtaccggactatgattgaattgggccttgaa
gatgagctactggagtatggaggtcctgatttagtgccgttcctgcaaaatgctggccgt
gaaccattgcaggaggtccgagctgtttctaaaatatccacaacttctccctttggtcat
tccaaagcatccatcacatctactcaagcaaaatacttcgatctgttggcacggtattat
gtcttgaagaggcagcatatgcttgcagcacacatattgctgagactggctgaaaggcgc
tcaactgatgcaagagatgttcctagtcttgaacagaggcgccaatacttaagcaatgct
gtcctacaggcaaagaatgcaagtgatagtggtggtttggtaggttccacaaggggtgca
ggtgcactggacagtgggttgctagatttgcttgaggggaagcttgtggttcttcggttt
caaataaaaataaaagaggaactggaggctatagcttctgtgttacaatcttcatctagc
atgtctgagcccatccaagatggatcagtcgctgataacaatgccaatgtggagtatgca
aaagttgcacaggaaaaagccaatgaactatcgttggatttaaaaagcattacacaacta
tataatgaatatgcagttccttttgaactctgggaggtatgccttgagatgctttacttt
gcaaattattctggtgatgctgatagtagcattgtaagagaaacctgggctagactaatg
gataaagctctttcaagtggtgggattgctgaagcgtgttcagtattgaagagggttggt
tcccacatataccctggagatggagctgttttacctttagacactttatgtcttcacctt
gagaaggctgctttggagagactggagtcaggggttgaatctgttggagatgaagatgta
gcaagagctcttcttgcagcttgcaagggtgcaactgaacctgtcctgaatgcatatgat
cagttgttgtcaaatggagctattttgccatctcccaaccttaggttacgccttcttcga
tcagtgctagtggtactgcgagagtgggcaatgtctgtttttgcacagaggatgggtaca
acaacaagtggagcttccctgatattaggcggaacattctcacaggagcaaacaacagtc
attaaccagggtattcgtgataagatcacaagtgctgctaacaggtacatgacagaagtg
aggaggttgccacttccccagagcaaaactgaggctgtttaccgaggatttcgagaactt
gaagagtctctgataagtcctttttcttttgatcgattctaa
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