Manihot esculenta (cassava): 110604580
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Entry
110604580 CDS
T05761
Name
(RefSeq) probable CoA ligase CCL6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00061
Fatty acid biosynthesis
mesc00071
Fatty acid degradation
mesc01100
Metabolic pathways
mesc01212
Fatty acid metabolism
mesc04146
Peroxisome
Module
mesc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
110604580
00071 Fatty acid degradation
110604580
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110604580
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mesc01004
]
110604580
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110604580
Enzymes [BR:
mesc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
110604580
Lipid biosynthesis proteins [BR:
mesc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
110604580
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of breast milk
110604580
Exosomal proteins of breast cancer cells
110604580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
110604580
NCBI-ProteinID:
XP_021598501
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Position
17:complement(30431896..30437194)
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AA seq
660 aa
AA seq
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MSMEYLVKVEESRPASDGKPAAGPVFRCIYAKDGLLEVPAGLESPWKFFSDSALKNPNNK
MLGRRQLTDSKVGPYVWLTYKEVYDSAIRIGSSMRSRGLNPGDRCGIYGSNCPEWITAME
ACNSQAITYVPLYETLGPNAVEFIINHAEVSLAFVQETKLSSILPCLPNCNSYLKTIVSF
GSVSSMQKKEAEEQGVSCFSWEEFCQLGSLDCELPPKQKTDICTIMYTSGTTGEPKGVIL
TNGAIMAEVLSVDHLLFLTDRVATEEDSYFSFLPLAHVYDQIIETYCIYRGASIGFWRGD
VRYLIEDAQELKPSIFCGVPRVYDRIYTGTMSKISSGGALRKKLFDLAYNYKLGNLEKGL
PQAQAAPLLDRLVFEKTKQTLGGRVRIMLSGAAPLPRHVEEFLRVTSCSTLSQGYGLTES
CGGCLTSIGDVFPMVGTVGVPMTTIEVRLESVPEMGYDALSGLPQGEICIRGNSLFSGYH
KRDDLTKEVLIDGWFHTGDIGELQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYTRCP
LVSSIWIYGNSFESFLVAVVIPERQALEDWAATHNVTEDFKYLCKNLKARKYILDELNST
GQKHKLRGFEMLKAIHLEPHPFDMERDLITPTFKLKRPQLLKYYKGCIDQLYSEAKGLKA
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggaatacctagtgaaggttgaagaatcaagacctgcaagtgacggaaaacca
gcagcagggcctgttttcaggtgcatttacgccaaagatggcctcctcgaggtgcctgcc
ggactggaatctccttggaaattcttcagtgattctgctcttaagaaccccaacaacaaa
atgctaggacgacgtcaactcacagattcaaaggttggtccttacgtgtggctcacttac
aaagaggtttatgattctgctatcagaataggttcttcaatgaggagccgtggtctcaat
cctggagatcgttgcggtatatatggttccaactgcccagaatggattactgcaatggag
gcttgcaacagccaggctattacctatgtaccactgtatgaaactcttggtcctaatgca
gtggagtttatcattaatcatgctgaagtttcattagcttttgttcaggagaccaagctt
tcttctattttgccttgtctcccaaactgcaattcatatctgaaaaccattgttagcttt
ggaagtgtttctagcatgcagaagaaggaagctgaggaacagggagtgtcttgcttttca
tgggaggaattttgccagctgggaagcttggattgtgaattgcctcctaagcagaagact
gacatctgcacaataatgtatactagtggaacaacaggcgaaccaaaaggggttattctt
acaaatggagctatcatggctgaagtactgtccgtcgaccatttactttttctgacagac
agagtggccacagaagaagattcatacttctcttttcttcctttggctcatgtgtatgat
caaataattgagacctattgcatctacagaggtgcctctataggattctggagaggggat
gtaaggtacttgattgaggatgctcaggaattgaagccaagtatattttgtggagtccct
agagtctatgaccgtatatacactggtactatgagtaagatttcatctggaggtgctttg
aggaagaaattgtttgaccttgcttataactacaaactaggcaatcttgagaagggattg
cctcaagctcaagcagcaccactcttggacaggcttgtctttgaaaagacaaaacaaacg
ttgggaggtcgtgttcgtatcatgttatctggtgctgcacctttgcctaggcatgtggag
gagttcttaagagtcacctcctgctctactttatcacaaggatatggtctaacggaaagt
tgtggaggttgtttaacatctattggtgatgtgtttccaatggttggaactgttggagtc
cccatgacaaccattgaagtaaggcttgagtctgtgccggagatgggatacgatgcatta
tccggtcttccacagggcgagatttgcatcaggggcaattcattgttctctggttaccac
aagagagatgatctaacaaaagaagtccttatcgatgggtggtttcatacaggtgacatt
ggagaattgcaacccaacggagcaatgaagataattgacaggaaaaagaacatattcaag
ctatctcaaggtgaatatgttgctgtggagaacctggaaaacacatatacgcgatgccct
cttgtatcatcgatttggatctacggcaacagtttcgagtcatttcttgttgctgtagtg
atccctgagagacaggcacttgaagattgggcagcaacccataatgtgactgaggatttc
aaatatttgtgcaaaaacctgaaggctaggaaatatattttagatgagttgaatagcact
ggccagaaacacaaacttagaggatttgaaatgttaaaagcaattcatttggaaccacat
ccatttgatatggagagggatctgataactccaacattcaagctgaagaggcctcagttg
ctcaaatactacaagggctgcattgatcaattgtacagtgaagcaaagggattgaaggca
tga
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