Manihot esculenta (cassava): 110604668
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Entry
110604668 CDS
T05761
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110604668
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110604668
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110604668
NCBI-ProteinID:
XP_021598622
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Position
17:31548420..31550318
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AA seq
406 aa
AA seq
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MSTATLSSLFLFFFFAIVTPHFVFSSPVPDPELVVQEVHRSINASRRNLAFLSCGTGNPI
DDCWRCDPNWERNRQRLADCAIGFGKDAIGGRNGRIYVVTDSGDDDAVNPKPGTLRYAVI
QDEPLWIVFQRDMVIQLKQELVMNSFKTLDGRGASVHISGGPCITIHYATNIIIHGLHIH
DCKQGGNGNIRDSPHHSGWWTQSDGDGISIFTSKHIWVDHCSLSNCHDGLIDAIHGSTAI
TISNNYFTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSASPTINSQGNRFLAPNDRSKKEVTKHEDAPESEWRHWNWRSEGDLMMNG
AFFRQSGAGASSSYARAASLSARPSSLVDSMTRTAGALGCRRGSRC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgctactctttcttcccttttcctcttcttcttcttcgccattgtaacccca
catttcgttttctcttccccagttcctgatcctgagctagttgtacaagaggtgcacagg
agcatcaatgcttcaaggaggaaccttgccttcctctcatgtggaaccggcaaccccatt
gacgactgctggcggtgcgaccccaattgggagaggaaccgtcagagattagcagactgt
gctattgggtttgggaaggacgccattggaggaagaaatggtagaatttacgtggtcact
gactctggtgatgatgatgctgtgaacccaaagcctgggactctcaggtatgcagtgatt
caagatgaacccttgtggattgttttccaaagagatatggttattcaactgaagcaagaa
ctggtgatgaattctttcaagactcttgatggtagaggagctagtgttcacatttctgga
ggaccatgcattactattcactatgcaactaatatcatcatccatggattacacatacat
gattgtaagcaaggagggaatggtaatataagagattctcctcatcactcagggtggtgg
actcaatcggacggtgatggtatttccatcttcacaagcaaacatatctgggtcgaccat
tgctcgctctctaattgccatgatggtttgatagatgccatccatggatctacagccatt
actatctctaacaactacttcactcatcatgacaaggtcatgctcttgggtcatagcgac
tcgtatactcaagacaagaacatgcaagttactattgcctttaatcattttggagaagga
ttagtgcagagaatgccaaggtgtaggcatggatattttcatgtggtgaacaatgattat
actcactgggaaatgtatgccattggtgggagtgcttcccctaccattaacagccaaggg
aatagatttcttgcaccaaacgacaggtccaagaaagaggtgaccaaacatgaggatgcg
cctgagagcgagtggagacactggaactggaggtcagagggagacttaatgatgaacgga
gcatttttccggcaatcaggtgcaggagcttcttcaagctatgctagagctgctagcctg
agtgcaagaccatcttctcttgtagattcaatgaccaggactgcgggtgcacttggctgc
aggaggggttctcgttgctag
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