Manihot esculenta (cassava): 110604711
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Entry
110604711 CDS
T05761
Name
(RefSeq) transcription factor MYC2
KO
K13422
transcription factor MYC2
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04016
MAPK signaling pathway - plant
mesc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
110604711
04075 Plant hormone signal transduction
110604711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110604711
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
110604711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
bHLH_SAC51
PUMA_CC
bHLH_INO4
Bap31_Bap29_C
Phage_scaffold
Motif
Other DBs
NCBI-GeneID:
110604711
NCBI-ProteinID:
XP_021598682
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Position
17:complement(6021490..6024139)
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AA seq
684 aa
AA seq
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MTDYRISSTMNLWTDDNASVMEAFMNSDLAALWPPPQSAASTSTPAPPNADASRTLINQS
QQLFNQETLQQRLQTLIEGARESWTYAIFWQSSYDYSGASVLGWGDGYYKGEEDKGKGKS
KGSSSSVAEQEHRKKVLRELNSLISGPTAVTDDAVDEEVTDTEWFFLVSMTQSFVNGSGL
PGQAFFNGNPVWVAGPDRLSASPCDRARQGQVFGLQTLVCIPSANGVVELGSTEVIYQSS
DLMNKVRVLFNFNSLEVGSWPMGTNPDQGENDPSSMWISDPSQSGIEMKDGNSTVPSSGG
TTTANNSNNNNHNGSKGIQFGNPNSSSVTENPSGIQLQNHQQGNQQQQQMTQTQTQTQTQ
SFFTRELNFGEYSAFDGSSARNGNSNLLKPESGEILNFGESKRSSCSANGNFFSGHSQFA
VEENNKKKRSPNSRGSNEEGMLSFTSGVILPSSGVVKSSGGTGDSDHSDLEASVVRQTET
SKVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASL
LGDAIAYIKELRSKLQASESDKEELEKQVESMKKEFASKDTRQEPPPRDQELKMSNTQGS
KPIEVDVDVKIIGWDAMIRIQCSKKNHPAARLMAALKELDLDVHHASVSVVNDLMIQQAT
VKMGSRFYTQEQLRVALSTKVGDT
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgacggactatcggatatcatccacgatgaatctgtggacggacgataacgcatcggtc
atggaagccttcatgaactctgatctcgccgctctttggccgccgccgcaatccgccgct
tctacttccactcctgcgccacccaacgccgacgccagtaggacccttatcaaccaatct
cagcagctttttaatcaggaaaccctccagcagcgtctccagaccttgatcgagggagcc
agggagagctggacctacgccatcttctggcaatcgtcgtatgattactcgggtgcgtcg
gtgttggggtggggtgatgggtactataaaggagaggaggataagggtaaaggcaaatct
aaaggttctagctcttcagttgcagagcaggagcaccgaaagaaggtgctacgggagctc
aattcgctgatctcaggtcccactgccgtcaccgacgatgctgttgatgaagaagtcact
gataccgagtggttctttctcgtttccatgactcagtcatttgttaatggaagtgggttg
ccgggtcaagccttttttaatgggaatccggtctgggtggctggacctgaccggctttct
gcgtcgccgtgcgaccgcgccaggcagggtcaagttttcggcttgcagaccttggtgtgt
atcccatcagcgaatggagttgtagagcttggttcaactgaggtgatttatcagagctcg
gatctgatgaacaaggttagggttttgtttaatttcaatagtttggaggtgggttcatgg
ccgatgggaacgaatcctgaccagggtgagaatgatccatcctcgatgtggatcagtgat
ccatcgcagagtgggattgaaatgaaggatggaaatagcacagttccatcatcaggtggc
accacaactgcaaataatagcaacaataataaccataatggctcgaaagggattcaattt
gggaatcccaattcgagtagcgtgactgaaaaccctagtggaattcaattgcagaatcat
caacagggtaaccagcagcaacagcagatgacacagacacagacacagacacagacacag
agcttttttactcgtgagttgaactttggggaatatagtgcttttgatggtagtagtgct
aggaatgggaattccaatctgttgaagccagaatcaggggaaattttgaattttggggag
agtaagaggagttcttgtagtgcaaatggaaatttcttttcaggtcattcacagtttgca
gtggaggagaataacaagaagaaaagatccccaaattcaagggggagcaatgaagaaggg
atgctttcctttacttctggggttatcttgccttcttctggtgtggtgaaatcaagtggt
ggtacgggggattcagaccactctgatcttgaagcctctgttgttagacaaacggagact
agcaaagttgtggaacctgaaaagaagccacggaaacggggaaggaaaccagccaacgga
agagaagaaccactgaatcatgttgaagcagagagacagagaagagagaaacttaaccag
aggttctattccctgcgagctgtagttcccaatgtgtcaaagatggataaagcttcgctt
cttggagatgccatagcttatatcaaggagcttagatcaaagctgcaagcttcagagtct
gataaggaggagttggagaagcaagtggaatcaatgaagaaagagtttgctagcaaagat
acacgccaagagccacctcctcgtgatcaagaactcaagatgtcaaatacccagggaagc
aaaccgatagaagtagatgtagatgtgaagataatcggatgggatgcaatgataagaatc
caatgtagcaaaaagaatcacccagcagctaggttaatggcagctttgaaagagttggac
cttgatgttcaccatgccagtgtgtcggttgtgaatgatttgatgatccagcaagccacg
gtgaagatgggtagtcgattttacacacaggagcagctcagggtagccttatcaaccaaa
gttggtgacacctga
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