Manihot esculenta (cassava): 110604722
Help
Entry
110604722 CDS
T05761
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110604722
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
110604722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
110604722
NCBI-ProteinID:
XP_021598692
LinkDB
All DBs
Position
17:28678033..28701152
Genome browser
AA seq
1612 aa
AA seq
DB search
MDQNQRSIAATTAASRGYHFHPARVAVINLFDVYLGRSSRQKADDSTREPPNKAQKRILA
LNRELPPRNEQFLLDFEQLQSQFPDQDQLRPITESVLISLVIECCNHAPRAEFLLFALRS
LCSIGYINWDTFLPSLLSSVSSAEMSAGQGVQPMPAISSMNLSQTGIPPSSAIPSSSNFQ
SSNPTSPLPSVHGIGSPAQSAVEPSSGATMSPVKSADIPVNGQQSTTRVNLSIRDNAISS
LRQLCCKIILTGLEVDLKPVTHSDIFHHMLNWLVSWDQRQHGVEESDGMKSWRPDKALTE
WLHSCLDVIWLLVDESKCRVPFYELLRSGLQFIENIPDDEALFTLILEIHRRRDMMAMHM
QMLDQHLHCPTFGTHRILSQTTTNISVEAVANLRYSPITYPSVLGEPLHGEDLANSIQRG
SLDWERALRCIRHALRTTPSPDWWKRVLLVAPCYRNPSHAPTPGAVFTSSMICEATIDRI
VELLKLTNSEVNCWQDWLVFSDIFFFLMKSGCIDFVDFVDKLVSRLTEGDQHILRTNHVT
WLLAQIIRVELVMNALTTDARKVETTRKIISFHREDRSSDPNNPQSILLDFISSCQNLRI
WSLNTSTREYLNNEQLQKGKQIDEWWRNVTKGDRMIDYMNMDDRSIGMFWVVSYTMAQPA
CETVVNWLSSGGVSEFLPGANMQSNERLMVMREVSPLPMSLLSGLSLNLCLKLVFQLEDS
LFAGQVIPSIAMVETYCRLLLLAPHSLFRSHFSHLAQRYPSLLSKPGFTLLVFEIVNYRL
LPLYRYQGKSKSLMYDVTKIVSTLKGKRGDHRIFRLAENLCMNLILSLREFFSVKREGKG
PTEFTETLNRVTVITLAIIIKTRGIADADHLVYLQTMLEQIMATSQHTWSEKTLRHFPPL
LRDALIGRIDKRGQAIQAWQQAETTVIHQCTQLLSPSADPSYVTTYINHSFPQHRQYLCA
GAWILMQGHPENINSEKLARVLREFSPEEVTANIYTMVDVLLHHIHMELQHGHSLQDLLL
KTCANLAFFVWTHELLPLDILLLALTDRDDDPHALRIVISLLDRQELQQRLKLFCMNRGP
PEHWLFSGIFKRLELQKALGNHLSWKDRYPTFFDDIAARLLPVIPLIVYRLIENDAIDQA
DRVLAMYSPFLAYHPFRFTFVRDILAYFYGHLPGKLIVRILNVLDLSKIPFSESFPQHIS
SSNPVMCPPPEYFATLLLGLVNNVLPPLNTNSKYGSVADSLCSSMRNPNPKTPATSQSGP
TNTSEGQKAFYQIQDPGTYTQLVLETAVIELLSLPVTASQIVSSLVQIVVNIQPTLIQSS
NGLHGAPNGVVQGSGLPTSPSGGSTDSLGASRSTPSVSGINTANFVSRSGYTCQQLSCLL
IQACGLLLAQLPPDFHLQLYMEASRIIKESWWLTDGKRSLGELDSAVGYALLDPTWAAQD
NTSTAIGNIVALLHAFFSNLPQEWLEGTHVIIKHLRPITSVAVLRIAFRIMGPLLPRLAN
ARSLFSKTLLLLLNTMVDVFGRNSQPSTPAEASEIADLIDFLHHVVHYEGQGGPVQANSK
PRPEVLAQCGRAAESLRPDVQHLLSHLKPDMNSSIYAATHPKLVQNPSSSLG
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaaccagagatcaatagcagcaacaacggcagcttcccgcggctaccatttc
cacccagcacgagttgctgttatcaatctctttgatgtctatttaggaagaagcagccgc
caaaaagctgatgattcgacccgcgaaccaccgaacaaggcacaaaagcgaatacttgct
cttaacagagagctccctcctcgaaatgagcaattccttttagattttgagcaactgcaa
agtcagtttccggaccaagatcagctccgacctatcactgaatctgtgctcatttctctt
gttattgagtgctgtaatcatgccccacgggcagaatttcttctctttgctttgcggagc
ttatgcagtataggatacattaactgggatactttcttgccatcccttctttcttctgta
tcctctgcagaaatgtcagcaggtcagggcgttcaaccaatgccagctatttcatctatg
aatttatcacagactgggattcctccttccagtgcaatacccagttcatccaattttcag
tcttcaaatcctacatctccattaccttcagttcatggtatcggttctcctgcccaatca
gcagttgaaccatcatctggcgctactatgtctcctgttaagtcggctgatatccctgtt
aatggtcaacaatctacaacaagggttaacttatctataagggataatgctataagcagc
ctacgccagctatgttgcaagattattttaactggtcttgaagttgatttaaagccagtg
actcactctgatattttccaccatatgttgaattggcttgttagttgggatcaaagacaa
catggagttgaagaatctgatggtatgaaatcatggagacctgacaaagctctaactgaa
tggctgcacagttgcttagatgttatttggttgttggtcgatgagagtaagtgcagagtg
ccattttatgaattgttgcgcagtggactgcagtttattgagaacataccagatgatgaa
gctttatttacacttatcttggagatccataggaggcgagatatgatggccatgcatatg
caaatgctagatcaacaccttcattgtcccacatttggtactcatcggattctgtctcaa
acaactactaacatttcagtagaagccgtagcgaacttgcgctattccccaatcacatat
cctagtgtacttggagaaccactgcatggagaggatcttgcaaattccattcagaggggg
agcttggactgggagagagctttgcgctgtataagacatgctcttcgcactactccatca
cctgattggtggaagcgtgtgctccttgtggctccttgctataggaatccttctcatgca
ccaactcctggtgcagttttcacttctagcatgatttgtgaggcaaccattgataggatc
gttgaattgttgaagttaacaaattcagaagtaaattgttggcaggactggcttgtcttc
tctgatatattttttttccttatgaagagtgggtgtatcgactttgttgattttgtggat
aagctagtttcacgtctcacagagggtgatcagcacattcttcgcacaaatcatgtgaca
tggctgcttgcccaaattattcgtgttgaacttgtgatgaatgcgttaactacagatgct
agaaaggtagagacaaccagaaagattatatcatttcatagagaagatcgaagttcagat
cctaataatcctcaaagcatcttgcttgattttataagcagttgtcagaatttacgtata
tggtcattgaacacatcaacaagggaatatttaaataatgagcagcttcagaaaggaaaa
caaatagatgaatggtggagaaatgtgaccaaaggggaccgcatgattgattacatgaat
atggatgatagatcgattggaatgttttgggttgtgtcctacactatggcacagccagct
tgtgaaacagtggtgaactggttgtcctctggtggcgtttctgagtttttaccaggggca
aatatgcagtccaatgagaggttaatggtgatgagggaagtaagcccattaccaatgtca
ttgttgtctggcctttcgctgaatctgtgtttgaagttggttttccagctagaagattct
ttatttgctggacaggttattcctagcattgcaatggttgaaacatattgtcgattgttg
ctccttgcacctcactcattgtttcgctcacacttcagtcatttggcacagaggtatcca
tccttgttgagcaaacctggatttactctcttggtatttgaaattgtgaactatcggtta
cttccactgtacaggtaccaagggaaaagcaaatcattgatgtatgatgttacaaaaata
gtttctactttaaaagggaagcggggagatcatcgaatatttaggctggcagaaaatctg
tgcatgaacctaattttatcactgagagaatttttctcagtgaaaagagaagggaagggt
ccaactgaattcactgaaactttgaatcgtgtaaccgtaataactcttgctattatcatt
aaaactcgtggaattgctgatgcggatcacttagtttatcttcagactatgctagaacag
ataatggcaactagccagcacacatggtcagagaaaacattacgccactttcctcctctt
cttcgtgatgctttgattgggaggatagataaaagggggcaagctattcaagcgtggcag
caggcggagacgactgtgattcaccaatgtacccagcttctgtcaccgtctgctgatcct
agttatgttacgacttacatcaaccatagttttcctcaacaccgacaatatctgtgtgct
ggtgcatggatactgatgcaggggcaccctgaaaacattaatagtgaaaaactggcacgt
gttttgagagaattctcccctgaagaagtgacagcaaacatatataccatggtggatgtt
ctacttcaccatattcatatggaacttcagcatggacattccttgcaggaccttctattg
aaaacttgtgcaaacctcgccttctttgtttggactcatgagcttcttcctttggatatt
ttgcttctggcccttactgaccgtgatgacgatccccatgctttgcgtattgtgatcagt
ttacttgataggcaagagcttcaacagagattgaaattgttttgtatgaatcgtgggcct
cctgagcattggcttttttcaggaatattcaagcgtcttgaattgcaaaaggcgctgggc
aatcatctctcatggaaggacaggtatcccaccttttttgatgatattgcagcccgtttg
cttccagtcatccctttaattgtttatagacttattgaaaatgatgccatagatcaagct
gatagagttttggccatgtattctccatttctagcatatcacccctttagattcacattt
gttcgtgatatacttgcatatttctatgggcatcttcctggaaagcttattgtgcgaata
ctaaatgtgcttgatctcagcaagatcccattttctgagtcattcccacagcacattagt
tcatcgaaccctgtcatgtgcccacctcctgagtattttgccactcttctgttggggctg
gtgaataatgtgttacccccattaaataccaactcaaagtatggatcagttgcagatagt
ctttgtagttcaatgcgcaatccaaatcccaagactccagcaacatcccaatctgggccc
actaatacatccgagggccaaaaagcattctatcaaattcaagatcctggaacttatact
caactggttcttgaaacagcagtaattgaactattatcacttccagtgactgcttcccaa
attgtatcatctctggttcaaattgtagttaatattcaaccaactctaatacagtccagc
aatggtctgcatggagctccaaatggtgttgtgcaaggatcaggcttaccaacatcccct
tctgggggaagcacagattccttaggtgcaagtagatcaacgccttcagtttcaggaatc
aatactgctaattttgtttcccgaagtggttacacatgccagcaactatcttgcttattg
attcaagcttgtggtctcctactggctcagcttcctcctgatttccacttgcaactttat
atggaggcatcacgtatcataaaagagagttggtggctcactgatggtaaacgatcactt
ggggaactagactctgctgttggctatgctttgttggatccaacatgggctgctcaggac
aatacctcaactgccattggcaatattgtcgccctgctacatgctttcttcagtaacctc
ccacaggaatggctagagggaacacatgtaattattaaacatctcagaccaataacatca
gttgcagtgttgaggatagcattccgtataatgggtccactgcttccccgacttgctaat
gctcgctctcttttcagcaagaccctcttgttgcttttaaacacaatggttgatgtgttt
gggagaaattcacagccatcaactccagctgaagcatcagaaatagcagatcttatagac
ttcctccatcacgttgtccattatgaagggcagggagggcctgtccaggcaaacagcaag
ccaagaccagaggtccttgctcaatgcgggagagcagcagaaagtctccggccagatgta
cagcatctcttatcccacctgaaaccagacatgaactcttctatatatgctgctactcat
ccaaaactggtccagaatccctcatcgtcattgggttaa
DBGET
integrated database retrieval system
