Manihot esculenta (cassava): 110604898
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Entry
110604898 CDS
T05761
Name
(RefSeq) LOW QUALITY PROTEIN: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110604898
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110604898
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110604898
Protein phosphatases and associated proteins [BR:
mesc01009
]
HAD phosphatases
Fcp/Scp phosphatases
110604898
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110604898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
HAD
Hydrolase
HAD_2
Erp_C
Motif
Other DBs
NCBI-GeneID:
110604898
NCBI-ProteinID:
XP_043808366
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All DBs
Position
17:complement(25942527..25943393)
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AA seq
288 aa
AA seq
DB search
MACKALKKYPTNSIRDRQXRRRQRKKSPAAILASIKKTICSCKSRFAEIFSKLARIRTPS
SHHKGYQILMKELKDQRQGLLQENDLEKDNICRAVFFSKRLPPLISPTKRTIFLDLDETL
VHSKTDPPPQKFDFMVRPNIDGEFMNLYVLKRPGVDAFLEALAEKYELVVFTAGLKEYAS
LVLNKLDVKGLISHRFYRDSCKQIDGKFVKDLSEMGRDLNRVVIVDDNPNCYIFQPENAV
PVRPFIDDLDDGEGELGKLVKFFDGCDRYEDMRDAVKQYLCEKMIRKR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcaaggccctcaagaaatacccaacaaattccattagagataggcagnnccgc
cgccgccaacggaagaaatctccggcagccatcctcgcatctatcaaaaaaacaatctgt
tcatgcaagagccgcttcgccgagatattctccaaattggcacgcattagaacccccagt
agccaccacaaaggttaccaaatcttgatgaaggaacttaaggaccaaagacaaggactc
ctacaagaaaacgaccttgaaaaagataacatttgccgagcggttttctttagtaaacga
ttaccgcccttgatttccccaactaagagaaccatctttcttgatcttgatgagaccttg
gtgcattccaaaacagacccaccacctcaaaagtttgattttatggtgaggccaaatatt
gatggagaattcatgaatctttatgtgttgaagcggccaggagttgatgctttcttggaa
gcactggctgaaaagtacgagttggtagtgttcaccgccggattaaaagaatatgcgtct
ctggttctcaacaagctagacgttaaggggttaatttcccaccggttttacagggattcg
tgcaagcaaattgatgggaagtttgtcaaggacttgtcggaaatgggaagggacttgaat
agggtagttattgtagatgataatcctaactgctacatattccagccggaaaatgcagtt
ccagtaaggcctttcattgatgatcttgatgatggggagggggagttggggaagttggtt
aagttttttgatggttgcgatcgttacgaggatatgagagatgctgtaaagcaatacctt
tgtgaaaaaatgatacggaaacgatag
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