Manihot esculenta (cassava): 110604904
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Entry
110604904 CDS
T05761
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Module
mesc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110604904
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110604904
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Nab2-zf4
Motif
Other DBs
NCBI-GeneID:
110604904
NCBI-ProteinID:
XP_021598887
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Position
2:complement(3697524..3698991)
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AA seq
390 aa
AA seq
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MARLVFFFFIFLAWHFNSSFAQTNYYNVLRYGAKPNGVTDSTNALFDAWLAACGSKGSSM
IYVPKGRYLVGSLLFKGPCKSPDITIQIDGTLVAPTGYQHLGQAGNWLSFYGVAGVSIVG
GALDAKGRHLWDCKAAGSNCPTGASTLSFTNAKNIKIKRLFSLNSQMFHIVLNGCHNVKI
EGVKVKAPGNSPNTDGIHVQFATDVVILNSSIKTGDDCISIGPGTKNLWIEGIQCGPGHG
ISIGSLANEMDEEGVQNVTIKRTIFRNASNGFRIKSWARPSNGFVERIRFKRAIMYNVQN
PIIIDQNYCPHNLNCPNQVSGIKINDVIYRGIRGISATPVAIKFDCSSKFPCSKIRLYNV
NLTYPNQTAHSSCVNVLGDTIGIVKPSGCL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcaagattagtcttcttcttcttcattttcttggcctggcacttcaactcatcattt
gcccaaacaaactattacaacgtcttacgttatggagcgaaaccaaatggagtaaccgat
tcaaccaatgccttatttgatgcatggcttgcagcctgtggctctaaaggttcaagcatg
atttacgtccctaaaggaaggtatttggttggctctctgctctttaaaggtccttgcaaa
agccctgatatcaccattcagattgatgggacgctggtggctccaacgggttatcaacat
cttggtcaagctggcaattggcttagcttctatggagttgctggtgtttccattgtgggt
ggagcacttgatgctaagggacgccacttgtgggattgcaaagctgcaggcagcaactgc
cctacaggcgcttcgacactgagctttaccaacgcaaagaacataaagatcaaacgctta
ttttcactaaacagccagatgtttcacatcgtgcttaatggctgccataatgtgaaaatt
gaaggggtcaaagtgaaagctcctggaaatagcccgaacacagatggcattcatgtgcaa
tttgctactgatgttgtgatattgaactcttcgattaaaacaggagatgattgcatctcc
atcggccctggaactaagaacttgtggattgaaggaattcaatgcggccctggtcatggc
attagcatcggaagcttagcaaatgaaatggatgaagaaggagttcaaaatgtaaccatc
aagagaacaatttttagaaatgcttcaaatggattcaggatcaaatcatgggctaggcca
agcaatggatttgttgaaagaattcgattcaagcgggctattatgtataatgttcaaaat
cctattattattgatcaaaattattgtcctcacaatttaaattgtcctaatcaggtttca
ggtataaaaattaatgatgtaatatatcgaggaattagaggaatctcagctacaccagtg
gctataaaatttgattgcagttctaaattcccctgcagtaagattagattgtacaacgta
aatttaacttacccaaatcaaaccgctcattcatcatgcgttaatgtgttgggggatacc
atcggcatagttaaaccctctggctgcttataa
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