Manihot esculenta (cassava): 110605052
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Entry
110605052 CDS
T05761
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
110605052
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mesc04040
]
110605052
Ion channels [BR:
mesc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110605052
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
110605052
NCBI-ProteinID:
XP_021599045
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Position
17:complement(32849980..32857586)
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AA seq
711 aa
AA seq
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MNRLISYPGSQFRQFQRLGENLVSQSFSASSVAADDHPLHILWRYQILDPDSDIVNYWNY
VFLITSIIALFIDPLFFFLPYVGTDGVCLSNDNHLAVLITFFRSIADMFFLLHMLMKFRT
AFVAPNSRIFGRGELVMDAREIARRYLKSDFVIDLAATLPLPQIVVWIVIPATRDNSADH
ANNALSLMVLIQYIPRIFLIFPLHQRIVKTTGFVAKTAWAGAGYNLLLYMLASHTLGASW
YLLSLARQFYCWKSECLKEDKSGTIGCIKPFLDCSSLGRFERQYWRNVTSVAANCDPKDS
NILFHFGIFAGAFTNDVATSPFIHKYLYCLWWGLRNLSSYAQTLETSTFLGENIFCIVTC
ILGLVLSAQLIGNMQTNLQSMTVRVEEWRIKRRDTEEWMRHRQLPPDLQERVRRFVQYKW
LATRGVHEESILRSLPLDLRREIQQHLRLNLVRRVQFFSQMDEQLLDAICERLVSSLSTQ
GTYIFQEGDPVNEMLFIIRGQLESSTTDGGRSGFFNSITLRPGDFCGEELLTWALMPNPS
ANLPSSTRTVRALSEVEAFALQAEDLKFVAQQFKRLQSKKLQHAFRYYSHQWRTWAACLI
QSIYRRYQKRKMAKELAARESLAYISIPEEEYYYYNELADGDYENESNERLSTDDANNVQ
HLGATILASKFAANTRRGTQQKDQVDSASRLKMPQLFKPVEPDFSVHKEDV
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaatagactcatatcctacccaggttcccagttccgccagttccagcgcctcggcgaa
aacctcgtcagtcagtcgttctctgcctcaagcgtcgcagcagacgatcaccctctccat
attctatggcgctaccagatcctcgatccggacagcgacattgtcaactattggaactat
gtcttcctcataacctccattattgctctcttcatcgatcctctctttttcttcctcccc
tatgtcggtacggacggcgtctgtttgagcaacgacaatcatctcgctgtcctgatcacc
ttttttaggtccattgctgacatgttcttcttgctgcacatgctcatgaagttccgtaca
gcttttgttgctccgaattctaggatttttggacggggtgaactcgtcatggacgctagg
gaaattgccaggcgttatctcaagtccgatttcgttatcgatctggcagctacgcttccg
cttcctcagattgtcgtttggatagtcattccagccacaagagataacagtgctgatcat
gccaataatgcactttctctcatggttcttattcaatatattcccagaatttttcttatc
ttccctttgcatcaacgtattgtaaaaactactggctttgttgccaaaactgcttgggca
ggagctggttacaatctcctcctttacatgcttgccagtcatactttaggagcttcatgg
tacctgttgtcgctggcgcggcaattctactgctggaagtcagagtgtctcaaggaggat
aagtcaggaactataggttgcattaagccttttctagattgtagcagtttgggaagattt
gaacgtcaatactggcggaatgtcactagtgttgctgctaattgtgacccaaaagacagc
aacattttatttcattttggaatatttgctggtgcttttacaaatgatgttgctacctca
ccgtttattcataagtacttgtattgtctttggtggggcttaagaaatttaagttcatat
gcacaaactttggagacaagcacatttcttggtgagaacattttctgcatagttacatgt
attcttggtttagttctttcagcacagttgattggcaacatgcagactaatttgcaatct
atgacggtgagagttgaagagtggaggattaagcgaagagatacagaggagtggatgagg
catcgccaattacctccagatttgcaggaacgtgtacgtcggtttgttcagtacaaatgg
cttgctacaagaggtgttcatgaagagtctatattgcgttcattgccattggatcttcga
cgagaaattcagcaacatttacgtctgaaccttgttcgtcgtgtccaattcttctcacaa
atggatgaacagctacttgatgccatatgtgaacgccttgtgtcttctttgagtactcag
ggaacctacatatttcaagaaggtgatcccgtaaatgagatgctgtttataattagagga
caattggagagctcaacgactgatggaggaagatctggattctttaactctatcaccctt
agacctggtgacttctgcggtgaggaattattgacatgggccctaatgcccaatcctagt
gcaaaccttccttcttcaactcggactgtcagagctctttctgaagtcgaagcttttgcc
cttcaagctgaagaccttaaatttgttgcacaacaattcaagagacttcaaagcaagaag
ctacagcatgcctttaggtactattctcatcagtggaggacatgggcagcttgcttgatt
caatctatttatagaaggtatcagaaaagaaagatggcaaaagagttggctgcacgagag
agcctcgcttatatttcaatcccagaggaagagtactactactataatgagctagcagat
ggagattatgagaacgaaagtaatgagaggttatcaactgacgacgcaaacaatgttcag
catctaggagccacaattttggcttcaaaatttgctgcaaatactagaagagggactcaa
cagaaagaccaggttgattctgcttccagattaaagatgccccagttgtttaaacctgtt
gagcctgatttctctgtacacaaagaagatgtttag
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