Manihot esculenta (cassava): 110605170
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Entry
110605170 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110605170
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110605170
Enzymes [BR:
mesc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
110605170
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110605170
Prokaryotic type
110605170
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
110605170
NCBI-ProteinID:
XP_021599225
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Position
17:complement(31735238..31744368)
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AA seq
536 aa
AA seq
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MAKSLSLLFLRPKSMAFSTSTTLKSALSPSPFSSQPTSLKKFVFSHSLRFFSSPSTPYPL
QYDMIINRPTPSPPAQTRRKPTRLSKSGANISPEPDSPKNPGSEMGLDSWVEQKLSGDGD
NVDMDKSRRKYYNKRRKRMYGSDSDEDGGKNEEGFVELIPEVVQFRSLHKREEELYFYDA
FAYPWEKDKHYKMVYQLEKKYFPDQCFDKAFIDPKDSNVNSNEKTKRSRSGKMAEKRDNG
VVHKQDDGRLVFFDEKKDEKETNSAKETNKDITERKVEEFFKCLKKVPSKDNEIDNREPY
LVTRSTQLPPTWDGPHGTVVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLL
IVCVGKATKLVDRYQGMVKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDVDIRKAAAS
FCGEIWQVPPMFSAIKVGGEKMYEKARRGENIELSPRRISIFQFEIERSLEDRQNLIFRV
VCSKGTYIRSLCADFGKALGSCAHLIALRRDSIGEYLADDAWEFKELEEAVTKNYF
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatctctttctctgctctttcttcgcccaaaatccatggctttctcaacatca
acgaccttgaaatctgctctctctccctcccctttttcctcacaacccacttctctaaaa
aaattcgtcttctcacattcactgaggttcttctcctccccttccactccttaccctctt
cagtacgacatgattatcaaccgcccaactccgtccccacctgcccaaactcgtcggaaa
cccacccggcttagtaaatctggggccaatatttcacctgagccggactcacccaaaaat
cctggttcagagatgggtcttgattcgtgggtcgagcagaagctatctggggatggagat
aacgtagatatggataagtctaggagaaagtattacaacaagaggagaaaaagaatgtat
gggtcagattctgatgaggatggtggaaagaatgaagagggctttgtagaattgattcct
gaggttgtgcagtttcgtagtttgcataagagagaggaggagttgtatttctatgatgca
tttgcttatccatgggaaaaagataagcattacaagatggtttatcagttggagaagaag
tatttccctgatcaatgcttcgataaggcattcattgatcctaaagattctaatgtgaat
tcaaatgagaaaacaaaaaggagtaggagtggtaagatggcagagaagagagataatgga
gttgtacacaaacaagatgatggaaggttggtgttcttcgacgagaagaaggatgagaaa
gagacaaattcagccaaggagactaataaggatatcacagagaggaaagtagaggagttc
ttcaagtgtttgaagaaagtcccaagtaaggataatgaaattgacaatagagaaccgtac
cttgtcacgagaagtacccagcttccacctacgtgggatggtcctcatggaactgtggtt
ttggtgaataagcctaaaggatggacttcatttacagtttgtggaaagctgcgtcgccta
gtgaaagtgaaaaaggtggggcacgctggaacacttgatcccatggcaactggattattg
attgtttgtgttggcaaagccactaagttggtagatagataccaaggtatggttaagggt
tatagcggagttttccgtttaggggaggcaacttcaacttgggatgctgattcaccggtt
atccagcgtgagccttgggagcacatcaaagatgtggacataaggaaagctgctgcttct
ttttgtggggaaatatggcaagttcctccaatgttctctgccatcaaagttggaggtgaa
aagatgtatgagaaagctagaagaggagaaaacatcgagctttctcccagaagaatttca
atttttcagttcgaaatagaaagaagtttggaagacagacaaaatttgattttccgagtt
gtgtgctctaaaggaacatatatccgatcactatgtgcagattttgggaaggctcttggc
agttgtgctcatttaattgcccttcgaagagattcaattggagaatacttggcagatgat
gcttgggagttcaaagagctggaagaggcagtaacaaaaaattatttctaa
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