Manihot esculenta (cassava): 110605192
Help
Entry
110605192 CDS
T05761
Name
(RefSeq) cullin-4 isoform X1
KO
K10609
cullin 4
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03420
Nucleotide excision repair
mesc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110605192
09124 Replication and repair
03420 Nucleotide excision repair
110605192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110605192
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110605192
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110605192
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
110605192
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
110605192
TCR (transcription coupled repair) factors
Cul4-CSA complex
110605192
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110605192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
110605192
NCBI-ProteinID:
XP_021599260
LinkDB
All DBs
Position
17:27072431..27080789
Genome browser
AA seq
822 aa
AA seq
DB search
MSPPTKRSATSTATTSSTSTSATANFPPMKKAKSQAVSACSPIDPSSNKNGLHHVLSGTT
ADNDVVFDPSSMTLDDDPKLDDRSPPPAANLSRKKATPPQPAKKLVIKLLKAKPTLPANF
EEDTWATLQSAIKAIFLKQPDSCDLEKLYQAVNDLCLHKMGGNLYQRIEKECEAHIHAAL
QSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLF
RKHLALSPEVEHKIVTGLLRMIERERLGESVDRTLLNHLLKMFTALGIYAESFERPFLDC
TSEFYAAEGMKYMQQSDIPDYLKHVEMRLHEEHERCLLYLDASTRKPLIATAERQLLERH
ISAILDKGFMMLMDGHRIEDLKRMYSLFLRVNALESLRQALSSYIRRTGQGIVMDEEKDK
DMVSSLLEFKASLDTIWEESFSKNEVFCNTIKDAFEHLINLRQNRPAELIAKFLDEKLRA
GNKGTSEEELEGTLDRVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKL
KTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPP
MDVRLPHELNVYQVDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQSV
VLMLFNDAQKLSFQDIKDATAIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFN
EGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLIT
ELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtctccccccaccaaacgctcagccacttccaccgccaccacctctagcacctctacc
agcgccaccgctaattttcctcccatgaagaaggccaagtctcaggccgtctctgcttgc
tcccctatcgacccttctagtaacaaaaacggcctccatcacgtcctctccggcactact
gcagataacgacgtcgtattcgacccctcttccatgactctcgatgacgatcccaagctc
gacgaccgttcccctcctcccgccgccaatttatctcgcaaaaaggctactcctcctcag
cccgcgaagaagcttgtcattaagctcttgaaagctaaaccaacactgcctgcaaatttt
gaggaggatacttgggcaacgctgcagtcagctattaaagctatattcttgaagcaacca
gattcctgtgacttggagaagctttatcaggctgtcaatgatctttgtctgcacaagatg
ggtggtaatctttatcagcgaattgaaaaggaatgcgaggcacacatacatgcagcacta
caatctttggttggtcaaagcccagatttggtggttttcttatcacttgttgagagatgc
tggcaggatctatgtgaccaaatgctgatgattcgtggtatagccttgtatctagataga
acctatgtgaaacaaactccaaatgtacgttcactgtgggacatgggtttgcagcttttc
cggaaacatcttgctttgtctcctgaagttgagcacaaaattgtcacaggccttttgcga
atgatcgagagggaaaggttgggtgaatcagttgatagaactctcctaaaccatcttttg
aagatgtttactgctttaggaatttatgctgaaagctttgagagaccatttctggattgc
acatctgaattctatgctgctgaaggcatgaaatacatgcagcaatcagatattccagat
tacttgaagcatgtagagatgaggttgcatgaagaacatgaaagatgcttactctatctt
gatgcaagtactagaaagccattaatagcaactgcagaaaggcagcttcttgaacgtcat
atatctgcaattctggataaggggttcatgatgctaatggatggccacagaattgaggat
cttaagagaatgtactcattgttcttaagggtcaatgcccttgaatcattaaggcaggcc
cttagctcatacattcgaagaactgggcaaggcattgtcatggatgaagagaaagataag
gatatggtttcatccttgttagaatttaaggcttctcttgacacaatatgggaggaaagc
ttttctaagaatgaagtattttgcaataccataaaggatgcatttgaacatctaataaat
cttcgtcagaaccggccggctgagctgattgcaaagtttttggatgagaagcttcgggct
ggaaataagggaacttccgaagaggagttggagggtacacttgatagagttttggttttg
ttcaggtttattcagggcaaggatgtgtttgaagcattttataagaaagatcttgctaaa
agactactattgggaaaaagtgcttctattgatgcagagaaatctatgatatcaaagctc
aagactgagtgtggcagccagtttacaaacaaacttgaaggaatgtttaaggatattgaa
ctatcaaaggagataaatgaatccttcaaacaatcatcccaggccaggacaaaacttcca
tcagggattgagatgagtgtccatgtcttaacaacagggtactggcctacgtatccacca
atggatgttcggcttcctcacgagctgaatgtctatcaggttgatattttcaaagaattc
tacttgagcaagtatagtggcaggcgcttaatgtggcaaaattcattgggtcactgtgtg
ttgaaagctgaatttccaaaaggtaaaaaggagctggcggtttctctatttcagagtgtc
gtgttgatgttgtttaatgatgcccaaaagcttagctttcaagatattaaggatgccact
gccatagaggacaaagaactgagacggactttgcagtctcttgcatgcggaaaagttcgt
gtcctacaaaagctgcctaaaggacgggatgtggaggatgatgattcatttgtcttcaat
gagggatttacggctcctctatatcgtataaaggtgaatgcaatccaaatgaaggaaact
gtagaggagaacacaagcaccactgagagagtatttcaagaccgccaataccaggttgat
gctgctattgttcggataatgaagactaggaaagtactaagtcacacacttctgattact
gaactcttccaacagctcaagtttcccatcaagccagctgatttgaagaaaaggatagag
agcctgatcgacagggagtacctggagcgagacaagaacaaccctcagatatacaattac
ctggcataa
DBGET
integrated database retrieval system
