Manihot esculenta (cassava): 110605351
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Entry
110605351 CDS
T05761
Name
(RefSeq) far upstream element-binding protein 1
KO
K13210
far upstream element-binding protein
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110605351
03041 Spliceosome [BR:
mesc03041
]
110605351
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
110605351
Spliceosome [BR:
mesc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110605351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
110605351
NCBI-ProteinID:
XP_021599554
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All DBs
Position
17:complement(30298271..30302650)
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AA seq
537 aa
AA seq
DB search
MGEPGHEEQQEQKEFADGGKRKLDAFELAKQRAQEIASRIASDADSKRPRLVSENSSEPS
RFSSSVSASPSFPVPFVAQPSLYSQGASKKIAIPNGKVGVVIGKGGETIKNIQLQSGAKI
QITKDQDADPHSLTRDVELMGTSEQISRAEELISDVIAETDAGGSASSAVHGLNTKQSGA
EQFAMRVPNDKVGLLIGKGGETIKYMQSRSGARMQIIPLHLPPGDASAERTVYINGSTEQ
IEAAKELVNEVISGKRIINPSGSNSYSQPVYPAAGNWVEPGQPTMQQQPQYGYAQPGNQP
TPSSYYGNYTQQPVWDQSNPSTMSQTPQQMTGYGYYGQQSQMGTAPPSYSYNQTPVASNT
YDHSYGQQTPNYGQNIPSQTPSQEMQKPYATSSYGSATVSSQSDGAISSQSSQVAPAYPP
TAYSQPVMNPPTYWPPQTGYDQTGYSQTAYGGLQPGQVPPPSTQPVYGQGGYPLQPSPSP
VNYAQGTHPHSYGQPPLETQSQSQPANNGHSQPLAYGAETNDGNSNPAVQEAVPSQS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaccaggacatgaagaacaacaagagcagaaagagttcgctgacggcggaaag
agaaagctcgacgctttcgaacttgccaaacaaagagctcaagaaatcgcctctcgaatc
gctagtgacgctgactcgaaacgccctcgtctagtctccgaaaactcgtccgagccttca
cgtttctcaagttcggtgtctgcctctccctctttccctgttccctttgttgcccaacca
agtctgtattcacaaggcgcaagtaagaaaattgcaattcctaatggcaaggttggtgtc
gttatagggaaaggaggagaaacaataaaaaatattcaacttcagtcaggggctaaaatt
cagattaccaaggatcaagatgctgatccccattctctaacaagggatgtggagttgatg
ggtacttctgaacaaattagcagggccgaagaactgatcagtgatgtgattgcagagacg
gatgcagggggctctgcttcatctgcagttcatggattaaatacaaagcaatctggagct
gaacagtttgcaatgagagttcctaatgacaaggttggattgctcattggcaagggcggt
gaaaccataaagtatatgcaaagcagatcgggtgctcgtatgcagattattcccctccac
cttcctcctggtgacgcatcagcagagagaacagtatatataaatggttcaacagaacag
attgaagcagccaaagaattggttaatgaagttatcagcgggaaacggatcataaatcca
tctggatctaatagctattcacagccagtttatcctgctgctggtaactgggtcgagcca
ggacaacctactatgcaacaacagccccaatatggatacgctcaaccaggaaatcaacct
acaccctcttcttactatggcaactacacccagcaaccagtttgggatcagtcaaaccca
tcaaccatgtcccaaacccctcagcaaatgactggatatggttactatggacaacaatct
caaatgggaacagctcctcctagctatagctacaatcagacacctgttgccagcaacact
tatgatcatagctacggtcagcagacaccaaattatggacaaaacattcctagtcagacc
ccatcacaagaaatgcagaaaccatatgcaacttcaagttatgggtcagctactgtatca
tctcaatcagatggggcaatttcatcccaatcaagtcaagtagcacctgcatatccacct
actgcttatagtcaaccagtgatgaatcctccaacatactggccacctcaaacaggatat
gatcaaacagggtactcccagactgcttatggagggttgcaaccaggccaagttcctcct
ccatctactcagccagtttatggacaaggtggatatcctcttcagccatctccttcacct
gtaaattatgctcaggggacacatcctcactcttatggacagccaccgctggagacacaa
tcccagtcacagccagcaaacaatggtcattcacagccgttggcttatggagctgaaact
aatgatgggaattcaaaccctgcagtgcaggaagctgttccttctcaaagctga
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