Manihot esculenta (cassava): 110605389
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Entry
110605389 CDS
T05761
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7 isoform X1
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
110605389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110605389
04121 Ubiquitin system [BR:
mesc04121
]
110605389
03029 Mitochondrial biogenesis [BR:
mesc03029
]
110605389
Membrane trafficking [BR:
mesc04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
110605389
Atg8 conjugation proteins
110605389
Ubiquitin system [BR:
mesc04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
110605389
Mitochondrial biogenesis [BR:
mesc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110605389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
2-Hacid_dh_C
rRNA_methylase
Motif
Other DBs
NCBI-GeneID:
110605389
NCBI-ProteinID:
XP_021599644
LinkDB
All DBs
Position
17:complement(25251968..25257006)
Genome browser
AA seq
715 aa
AA seq
DB search
MSKQDRSGGSILQFAPFQSFVDEGFWHRLSSLKLNKLGIDDSPISITGFYAPCSHSQVSN
HLALLSESLSSDESEQSSIPEISRGNRNRCAVPGIIYNTNTLEAYHALDKKSLLKEEAKK
IWEDIHTGKAVEDSAVLSRFLLISFADLKKWSFHYWFAFPALTFDPPVTVVDLKPASQWF
TSQEADSVSVACNEWRNSSLTADVPFFLVCIASNSHATIRHLKDWEACQGDGLKVLFGFY
DPCHLPNNPGWPLRNFLALICSRWNLKTVHFLCYRENRGFADLGLSLVGEAVITIPQGWG
DVHCVPNPVGWELNKGRHMSRVINLAKSMDPAMLAISAADLNLKLMRWRALPSLNLDKLS
STKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDNCLNGGDFKA
MAAVKSLKQIFPAVEAEGVVMAIPMPGHPVSSQEEESMLEDCRRLHELVDSHDAVFLLTD
TRESRWLPALLCANANKITITAALGFDSFLVMRHGPGPLNSTKTDDLNAEPGNALSADID
GLALADNGGKRLGCYFCNDVVAPTDSTANRTLDQQCTVTRPGVAPIASSLAAELFVDILH
HPIGIFAEGEIANSTNCDSSDQPLGILPHQIRGSLHQFSQMTLVGHASNSCTACCSTVVT
EYRKRGKEFLLQAINHPTYLEDLTGLTELMKSASSFNLDWDNEIDPDDDDDYLEL
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcaagaccggagtggtggatctatactccaattcgcaccgtttcagagtttc
gtggatgagggtttctggcataggttgtcttctttgaagctcaacaagttgggcatcgac
gattctcctatctccatcaccggtttctatgccccttgttcgcattctcaggtatcgaac
cacttggctcttctttcggaatccctgtctagtgatgaaagtgagcagtcgtcaattccg
gaaatttctcgcggcaataggaacagatgcgctgttcctgggattatttacaacaccaat
actttggaggcctatcatgctctggataagaaaagcttgctcaaggaggaagccaagaag
atttgggaagacattcataccggaaaggctgtggaggacagtgcagttttatcgaggttc
cttcttatttcatttgcagacctaaaaaaatggagcttccactactggtttgctttccct
gctctcacgtttgatcctcctgtaacagttgttgatttgaagcctgcttcacaatggttt
acttcacaggaggcagattctgtttcagttgcttgtaatgaatggcgtaactcaagctta
actgctgatgtgccattctttctggtctgtattgcttccaattcccatgctacaattagg
catttgaaggactgggaagcttgccagggtgatgggctaaaggtgctttttggtttttat
gacccatgtcatcttccaaataatcctggctggcctttacgcaacttcctagcactgatt
tgctcaagatggaatctcaaaactgtccactttttatgctacagagagaatcgtggtttt
gctgacctggggttgtcccttgttggtgaagccgtaattacaattccacaaggatgggga
gatgtgcattgtgtgcctaatccagtaggatgggaacttaacaaaggcagacacatgtcc
agggttattaaccttgctaaatctatggatccagcaatgttggccatatctgcagcagac
ttgaatttgaaactaatgagatggcgtgctttgccttcacttaatttggataaattatct
tctactaagtgtcttctcttaggagcaggtacacttggatgccaggttgcccgcatgctt
atggcttggggtgtacggaaaattacactacttgacaatggcagggtggcaatgtctaat
ccattaaggcagtccttgtatacattggacaactgtctcaatggaggtgattttaaagcc
atggcagcagttaaaagcctcaagcaaatatttcctgctgtggaagcagaaggtgttgtg
atggctataccaatgcctgggcatccagtgagcagccaagaagaagagagcatgcttgaa
gattgcagacgtctgcatgagttggttgattctcatgatgcagtttttctcttgactgat
acgagagaaagcagatggcttcctgccctcctttgtgcaaatgctaacaagattactata
actgcagctctagggtttgatagtttcctggttatgcggcatggtccaggtcctcttaac
tcaaccaaaactgacgacttaaatgctgaacccggaaatgctttatctgctgatattgac
ggccttgctttggctgataatggagggaagagattgggttgttacttctgcaatgacgtg
gttgcaccgactgattcaactgccaatcgcactttggaccagcaatgtactgttactcgt
ccaggggttgcccctattgcttcatctcttgcggctgaactttttgttgacatcttgcac
catcctattgggatatttgcagaaggtgagattgcaaactccactaactgtgatagctct
gaccaacctcttggtattctaccccatcagattcgaggttctcttcatcaattctcccaa
atgacacttgtaggccatgcttctaatagttgcactgcttgttgcagcactgtggtaacc
gaatatcggaaaagaggaaaagaattcctgctccaagcaattaatcatcctacctatctg
gaggatctcactggactcacagagttgatgaagtccgctagctcttttaatttggactgg
gataatgagattgatcccgatgatgatgatgattatcttgaattataa
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