Manihot esculenta (cassava): 110605465
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Entry
110605465 CDS
T05761
Name
(RefSeq) polygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Module
mesc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110605465
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
110605465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
NosD
Motif
Other DBs
NCBI-GeneID:
110605465
NCBI-ProteinID:
XP_021599749
LinkDB
All DBs
Position
17:7641840..7645393
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AA seq
370 aa
AA seq
DB search
MEEPVSEIYVKNCTIYDTDNGVRIKTWPALHGGSVSNIHFEHIVMQTVSNPIIIDQMYCA
HNLCNRKPSKVKISDVSFKNIRGSSRTPTADQLTCSSSVPCKNVELSNVNLRGAQPNTFD
VTKYGAKEGSDITKALLSAWKGACGAAGSGKVVIPKGKYSLGVVDLLGPCKGAMHLQVEG
TLVAPAKASEHRKNSWVTLKYLDRLTVSGGGAFDGQGEIAWQQKSCGDGCKKALPVNLRF
DFVTNSIVKDVTSIDSKQFHINLLGSKNLTFQRFLVKAPGHSPNTDGIHIGRSEQINIIN
SNIITDDDCISIGRGSRQVRITNVRCGHGHGISIGSLGKYEKEEPVYGIYVKNCKIYDTG
NGVRIKTWPL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacctgtgtctgaaatttatgtgaagaattgcacaatatacgacactgacaat
ggagtgagaattaagacttggcccgcattgcatggcggcagtgtgtcgaatatccatttc
gagcatatcgtcatgcaaaccgtcagcaatcccatcattatagatcaaatgtactgcgcg
cataacctatgcaatcgcaagccatcaaaagttaaaataagcgacgtcagcttcaagaat
attcgaggatcgtcaagaacgcccacagccgatcaattgacatgcagcagcagcgtacca
tgcaagaacgttgaactttctaacgttaacctccgcggagctcagcccaatacatttgat
gtcacaaaatatggtgcgaaggaggggtcggatatcactaaggctttactgagtgcgtgg
aagggggcttgtggagcagcgggttccggcaaagtcgtgataccaaaagggaagtactca
ttaggcgtggtggatttgctaggcccttgcaagggtgccatgcatcttcaagtggaagga
acgttggtggcgccagcaaaagctagcgagcaccgtaagaatagctgggttacattgaaa
tacctggaccgattaacggtatccggtggtggggccttcgacggacaaggagaaattgct
tggcagcagaagagctgtggcgacggatgcaagaaagcacttccagttaacctaaggttt
gacttcgtcaccaacagcatagtcaaggacgtgacttccatagatagcaagcagttccac
atcaatctcctcggcagcaaaaacctcaccttccagcggtttttggtgaaagcgccgggg
catagtcccaacacagatggaattcacattggacggtcggagcagatcaacattattaat
tcaaacattatcaccgatgatgattgcatctccattggccgggggagcaggcaagtacga
atcacaaacgtaaggtgcggacatgggcatggcattagtattggaagtttaggaaagtac
gagaaggaagaacctgtgtatggaatttatgtgaagaattgcaaaatatacgacactggc
aatggagtgagaattaagacttggccgctgtaa
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