Manihot esculenta (cassava): 110605474
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Entry
110605474 CDS
T05761
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110605474
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110605474
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
zf-BED
Motif
Other DBs
NCBI-GeneID:
110605474
NCBI-ProteinID:
XP_021599763
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Position
17:complement(30043514..30046940)
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AA seq
566 aa
AA seq
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MAAASSSVSLFRSREENQNQMMQQNSSTAAPTTAPQKKKRNQPGTPNPDAEVIALSPKTL
MATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKRKVYLCPEPTCVHHDPS
RALGDLTGIKKHYFRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRR
DSFITHRAFCDALAQESARHPTSLSTIGTHLYGNNNMGIGLSQVGSQISSLQDQNHPTSN
MLRLGSTGAAKFEHIIPPSNSSSLSTMPSSAFFMSDANQGSFPNKSLHGLMQLPDLQSST
DNSSTTNLFNLGFFPSNATAPNRMNDSDNANSSTVTTNLVNSRFLNSNPFHNGNGGQGTT
TLFANNMGDHVGSAGISSLYSNSMQQENITPHMSATALLQKASQMGSTTSSNNPNLLRSL
GSSPSTGIKSDRSPLVSTNFGSNSFGDATVGEVGLGIQMESDNQLQGLMNSLANGGSSIF
GGGHGQDNSFGGFTSGGVSLEQHHNSTKFRNVEEAKLHQSLGVGSDKLTLDFLGVGGMVR
SIGGGQHGINLSSLDSQSAQANNKRF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcttcatcgtctgtttctttgtttcggtctagggaggaaaatcaaaaccag
atgatgcaacaaaattcatccacagctgctccaaccacagcacctcaaaagaagaagaga
aatcaacctggaacaccaaatccagatgcagaggttatagcactatctcccaagacccta
atggcaacaaataggttcatatgtgaggtatgcaacaaagggtttcaaagggaacaaaac
ttgcagcttcacagaagaggacacaacctgccatggaagctaaagcagaagactacaaaa
gaagtgaagaggaaggtgtatttgtgccctgagcccacatgcgttcaccatgacccttct
agggctctcggtgaccttactggtatcaaaaagcactattttagaaaacatggagagaag
aaatggaagtgtgagaagtgctcaaagaagtacgctgttcaatctgattggaaagcccac
tcaaagacttgtggcactagagagtacagatgtgactgcggcactctcttctcaaggcgt
gacagtttcatcactcatagggcattctgcgacgcacttgctcaagagagtgcaaggcat
cctaccagcctgagcaccataggtacacatctctatggaaataacaacatgggcataggt
ctatctcaagtgggttctcaaatttcgtcgttgcaagatcagaaccacccaactagcaat
atgttgcggctgggaagcactggagcggcgaaattcgagcacataatccctccatctaat
tcgtcttccttgtcgacaatgccttcttctgccttcttcatgtcagatgcaaaccaaggt
tcatttcctaataaatccttacatgggttaatgcaacttcccgatcttcaaagctccacc
gacaactcttccactaccaatctcttcaaccttggcttctttccgagtaacgctactgct
cccaaccgaatgaatgatagcgacaacgccaattcaagcactgtaaccacaaacttggtg
aactcccgcttcttgaattcaaatccattccacaatggaaatggtggccaagggacgaca
accctcttcgccaataacatgggtgatcatgttgggtcagctggcatctcttctctttat
agcaattcaatgcaacaagaaaacatcacccctcacatgtctgccaccgcattgcttcaa
aaagcttctcaaatgggttctacgactagcagcaacaatcctaatttactaagaagcctg
ggaagttctccatcaaccggcattaaatctgataggtcaccgcttgtatctactaatttc
ggcagcaatagctttggcgatgcaactgttggggaggttggcctaggaatacaaatggaa
agtgacaaccaacttcaagggttgatgaattcacttgccaatgggggatcttccattttc
ggaggcggacacggacaagataacagcttcggcgggtttaccagcggcggagtctcattg
gagcagcaccataatagcacaaagtttagaaatgtagaggaggcaaagttacatcagagt
cttggcgtagggtcagataaactgaccttagattttcttggcgttgggggaatggtaaga
agcattggcggcggacagcatggaatcaatctaagctcactggattcacaatcagcacaa
gcaaataacaaacgtttttga
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