Manihot esculenta (cassava): 110605488
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Entry
110605488 CDS
T05761
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110605488
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110605488
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Ortholog
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
110605488
NCBI-ProteinID:
XP_021599781
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Position
17:30032851..30038529
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AA seq
590 aa
AA seq
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MAASSSSVPFFGIRDEDHQNQIKQQHSSTPTSSTAPPPPPQKKKRNQPGTPNPDAEVIAL
SPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKRKVYLCPEPTCV
HHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGT
LFSRRDSFITHRAFCDALAQESARNPPSTLNTIGSHLFVGSNMSLGLSQVGTQISSMQDQ
SSDILRLGGGGRSGQFDHLLPPSMGSSSFRTPQQMPSSAFFMQEPNQNYHEEHQSQQGLL
QNKSFHNGLMQFADLHNTTNNNPPPPASNLFNFSFMSSGSTGSNIVNSNDANNSNSNIPS
SGLLISNPFNTQNGTTGGGEGSGIFSNNIMGDHHHQMTSGVPPLFSSSVQNDNMVPHMSA
TALLQKAAQMGSTSSTNSASLLRSFGSSSSSGIKSDRPLVAANFGGIFNENDNNLHDLMN
SFATGNSSLFVSGHGQENPYSGNMEEAKLHQGMNVSIGGSDRLTRDFLGVGQIVRSMSGG
FSQREKHHHHHQQQQQQAPQPGIDMSSSLDSERNITAQTSQSFGGNGNFQ
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcttcatcatcggtgcctttctttggaattagggatgaagatcatcaaaac
cagataaaacaacagcattcctcaacaccaacttcatctacagctccgcctccaccgccg
cagaagaaaaaaagaaaccaacctggaacaccaaatccagacgcagaggtgatagcacta
tctcccaagaccctaatggcaacaaacaggttcatatgtgaggtatgcaacaaagggttc
caaagggagcaaaacctacagctccacagaagaggacacaatctgccttggaagctaaag
cagaagactacaaaagaagtgaagaggaaggtctatttgtgccctgagcccacttgcgtc
caccatgacccttctagggctcttggtgaccttactggaatcaaaaagcactactctaga
aaacatggcgagaagaaatggaagtgcgagaagtgctctaagagatacgctgttcaatct
gactggaaagcccattctaagacttgcggcactagggagtacagatgtgactgtggcact
ctcttctccagacgtgacagttttataactcatagggctttctgcgatgcgttggctcag
gaaagtgctcgcaatcctccttccaccttgaacaccattgggagccatttatttgtaggt
agtaacatgagcttaggcttatctcaagtgggtactcaaatatcctcaatgcaagaccaa
tctagtgatattttgcgacttggcggaggtggccggagcggacaatttgatcatcttctt
cccccgtctatgggttcgtcatctttccgaaccccgcagcaaatgccttcatctgctttc
ttcatgcaagaaccaaaccagaattatcatgaggaacaccaatcacaacaagggttattg
caaaataaatcatttcacaatggattaatgcaatttgctgatcttcataacaccacaaac
aataaccctcctccccctgcttccaatcttttcaactttagctttatgtccagtggcagc
actgggagcaacatcgttaacagcaatgatgccaacaactccaacagtaatataccatct
tcaggactgctaatatccaatcctttcaacacccaaaatggtaccactggaggtggtgaa
ggttccggtatcttctcaaacaacataatgggtgatcatcatcatcaaatgacttccggt
gtccctcctctctttagctcctcagttcaaaacgataatatggtccctcatatgtctgca
acggcactgcttcaaaaagcagctcaaatgggttcaacttcaagcaccaatagcgcatca
ctgttaagaagctttggcagctcatcctcaagcggaataaaatcagatagaccacttgta
gctgctaacttcggaggcattttcaacgaaaacgacaacaacctccatgacctaatgaac
tcatttgctactgggaattcatcccttttcgtttctgggcatggacaagagaacccctac
agtggaaacatggaggaagcgaagttgcaccagggtatgaacgtgagcattggagggtct
gatagattgaccagggactttctcggcgttggacaaatagtgcgaagcatgagcggaggg
ttttcgcaaagagaaaaacatcatcatcatcatcagcagcagcagcagcaggcaccacag
ccaggcatagacatgagctcctccttggattcagagagaaatattactgcgcagacaagc
caatcctttggaggaaatgggaattttcagtga
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