Manihot esculenta (cassava): 110605491
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Entry
110605491 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase ATL41
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110605491
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110605491
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
110605491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
DUF4149
Prok-RING_4
zf-RING_6
Zn_ribbon_IFT122_C
Protocadherin
DUF4381
zf-C3H2C3
FANCL_C
m04gp34like
TM_ErbB1
zf-RING_Vps41
RINGv
Lmo2446-like_N
V-ATPase_su_f
Prok-RING_1
PHD_NSD
PHD
zf-Vps39_C
Motif
Other DBs
NCBI-GeneID:
110605491
NCBI-ProteinID:
XP_021599786
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All DBs
Position
17:complement(24946068..24947053)
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AA seq
215 aa
AA seq
DB search
MGSEDDDKDQFGDNQKIIFAAIFSLFAVVILVVLLHLYSRYLFRRQQRRRRAALHRQSRQ
IAPADMESNYTIEPPKVGLDPLVIASFPPVAYKPTNQQELDHGEPMECSVCLGTIVEDAM
VRVLPNCKHMFHVECIDMWLGSNTTCPICRTVAEPRVPPEGSEVQVQVQVQPSAPPLASG
SGSLFGSFRWMVSRDRSSRARSCGDEVSVEDSGRQ
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggttccgaggacgatgataaagatcaatttggagataaccagaagatcattttcgcg
gcgatcttttctttattcgcggtggtgatattggttgttcttctccatctctactctaga
tatctctttcgccgccaacaaaggaggagacgtgctgctcttcatcgtcaaagcaggcag
attgcacctgcagatatggagtctaattatactatcgaaccacctaaggtaggacttgac
cctttagtcatagcctcgtttccaccagttgcatataagccgaccaaccaacaagagctt
gatcatggtgaacccatggagtgctcggtttgtttgggaaccatagtggaagatgccatg
gttagggttttaccaaactgtaagcacatgtttcatgtagagtgtattgatatgtggctc
ggatccaacactacttgtccaatatgtcgcactgtggctgagccaagggtcccgccagag
ggaagtgaggttcaagtccaagtccaggtccaaccctcagctccgcccttggctagtggg
tcaggatctctgtttggctcttttcgatggatggttagcagggacaggtcgtcaagggct
cgaagttgtggagatgaagttagtgtggaggattcgggaagacagtga
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