Manihot esculenta (cassava): 110605622
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Entry
110605622 CDS
T05761
Name
(RefSeq) polygalacturonase At1g48100
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Module
mesc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110605622
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110605622
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
NosD
Motif
Other DBs
NCBI-GeneID:
110605622
NCBI-ProteinID:
XP_021599947
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Position
17:complement(32034247..32037971)
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AA seq
480 aa
AA seq
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MGGFNLENISLITILIILLFVWSSRFEPCHARQGKYWRQSKTAPADSQFLQKEKLHGVSH
HHSSSLTKFMDSYYISPDETMETHKGQSSATFNVLDYGAKGDGHTDDTKAFEAAWAAACN
VEASTIVVPSGSIFLLHPISFSGPNCAENIVFQLDGKIIAPTTPGSWESELLQWIEFTTI
KGITIKGKGVIDGQGSVWWNDLPTHSPDSKVTNELRKKMPSTKPTALRFYGSTDVTVTGI
TIQNSPQTHLKFDNCTSVQVYGFTAASPGNSPHTDGIHLQNSQDVLIYGTDLACGDDCIS
IQTGCSNVYIHNVNCGPGHGISIGGLGKDNTKACVSNVTVRDIAIQDTLTGVRIKTWQGG
SGSVQGITFSNIQVSRVETPIMIDQFYCDSSKCSNESSAVAVSNINYADIKGTYTRNPIH
FACSDNLPCTGVSLDTIELKSVGEDSQPFCWNTYGDLKGTTVPPINCLQSGKSSKKVVYC
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtttcaatcttgaaaacatttcactgatcaccatcctcatcattcttttgttt
gtttggtcttcaagatttgaaccttgccatgcaagacaaggcaaatactggaggcaaagc
aaaactgccccagcagactctcagtttttgcagaaagaaaaacttcatggagttagccac
caccatagcagtagcttgacaaagttcatggattcttattacatttcgcctgatgaaact
atggaaacacacaaaggacagagctctgcaactttcaatgtccttgactatggggctaaa
ggcgatgggcatacagatgatacaaaggcatttgaggcagcatgggcagctgcttgcaat
gttgaggcatcaactattgtagttccatctgggtctattttccttctccacccaatatcc
ttttcaggccctaattgtgcagaaaacattgtatttcagttggatggtaaaatcatagct
cctactactcctggatcttgggaatcagagcttttacaatggattgagttcacaacaatt
aaagggatcacaatcaaaggtaaaggagtcattgatggacaaggctcagtctggtggaat
gatctaccaacacacagtccagactcgaaggtaaccaatgaactcagaaaaaaaatgcct
agcaccaagccaacagctctaaggttctatggaagcactgatgtgactgtcaccggcata
acaattcaaaacagccctcaaactcacctcaaatttgacaattgcacaagtgttcaggtt
tatggtttcactgctgcatcccctgggaacagcccacacacagatggaattcacctgcag
aactctcaagatgtgctcatctatggcactgatcttgcttgtggggatgattgtatatct
attcaaactggatgttcaaatgtgtacatacacaatgtaaattgcggacctggacatggc
atcagcatcggagggcttggaaaagacaacaccaaagcttgtgtttcaaacgtcactgtg
cgggacattgcaatacaagacacattaactggtgtcaggataaagacatggcagggagga
tcaggctcagtgcaaggaatcacattctcaaacattcaagtttctagagttgaaactccg
atcatgattgaccaattctactgtgatagcagcaaatgctcaaacgaatcttcagctgtg
gctgtgtcaaacataaactatgcggacattaaaggcacatatacaagaaatcctatacac
tttgcatgtagtgacaacttgccatgtactggtgtatcactagatactatagagctgaag
tcagttggagaagattcccaacctttctgttggaacacatatggagatctgaaaggtaca
actgtccctccaattaactgcttgcaatcaggcaaatcaagcaagaaagttgtatattgc
tga
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