Manihot esculenta (cassava): 110605635
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Entry
110605635 CDS
T05761
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110605635
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110605635
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_WDR11_1st
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
Beta-prop_Vps41
WD40_RFWD3
WD_LRWD1
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
110605635
NCBI-ProteinID:
XP_021599962
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Position
17:31937646..31942841
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AA seq
507 aa
AA seq
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MESFFQGIRSRELTGLQVRKRPYIGDKASDFAVCGALEVEHNGEETPPLAISFAKSSKNS
HVLAVSDEDGYLSLFDTRKNFPPYASQQEYSDKSRISDWEAHQNAIFDICWIKEDTNLLT
ASGDQTIKVWDAQKQKCTGVLMGHTGSIKSIYCHPTNSDLLVSGSRDGSFAMWDLRCKNA
SKNRRTEACITPTTMIRRAHLSPQSKRVRRKKAASMSITSVLYLKDGISIATAGAVDSIV
KFWDTRYLKAQVTQACPRPKSSTGKERRLHGTSSLSQDSNGVFLTASCMDNSIYLYNVLQ
LEKGPVRSFSGCRIESFYVKSEISPDAAQLLSGSSDGNAYIWQVNKPDTDPVTLKTHDGE
VTAVNWCPLDGKIATASDDFTVRIWNIQSNYFSNSRSSSSIRRRIMALPTEECRKLLRNE
EQMGLAKTPCSLHPSDEVCYEIDSPNSITMPSVSTPESQKKRFSSDSDSKETFERTPEAA
TKSPSSVLNPPPSSLKRKTIRDYFLAA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggagtccttcttccaaggcatcaggtccagagaactcaccggattgcaagttcgaaaa
cggccgtatatcggtgataaggcgtctgattttgctgtatgtggagctctagaagttgaa
cacaatggcgaagagacgcctccattggccatttcttttgccaagtcaagtaaaaattca
catgttttggcggtgtctgatgaggatgggtacttgagcttatttgacactcgaaaaaat
tttcctccttatgcatctcagcaagaatattcagataaatcaagaatcagtgattgggag
gctcatcagaatgccatatttgatatctgctggatcaaggaagataccaacttactcaca
gcttcaggtgatcaaactattaaggtatgggatgcacagaagcagaaatgcactggagtt
ctaatggggcatactggaagtattaaatctatatattgccatccaacaaattctgatctt
cttgtttccggttcaagagatgggtcctttgccatgtgggacttgaggtgtaagaatgct
tccaaaaatcgacgcactgaagcttgcataactccaacgaccatgatcagaagagctcat
ctttcacctcaatcaaagcgagttagaagaaagaaggctgcttccatgagcattacatca
gttctttatctcaaagatgggatttccattgccaccgccggagcagtggacagcattgta
aaattctgggataccagatatttgaaggctcaggtcactcaggcgtgtcctcgtcctaag
tcatcaacaggaaaggagagaagattacatggtacatctagcctgtcccaggattcaaat
ggtgtctttcttacagcttcatgcatggataatagtatctacttgtataatgtgcttcag
cttgaaaaaggtccagttaggtcattctctggatgccggattgaatcattttatgtgaag
tcggaaatcagtcctgatgcagctcaacttctaagtggctcaagtgatggaaatgcctac
atatggcaggtgaacaagcctgacaccgatcccgttacattgaaaacccatgatggagaa
gttacagcagtaaattggtgcccattagatggcaagatagctactgcttcagatgatttc
acagttcgcatttggaatatccaaagcaattatttttcaaattcaagatcatcatcttcc
atcaggaggagaataatggcacttccaactgaggaatgtagaaagctcttaaggaatgaa
gaacagatgggtcttgcaaaaactccttgttctttgcatccttcagatgaagtatgctat
gaaattgattctccaaactctatcacaatgccttcagtaagtactcctgaatcgcagaag
aaaaggttttcatcagattctgattcaaaagaaacctttgagagaacacctgaagcagca
acaaagagtccatcttctgtgttgaaccctcctccgtcttccctgaaaagaaaaactatc
cgggattattttctagcagcttag
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