Manihot esculenta (cassava): 110605827
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Entry
110605827 CDS
T05761
Name
(RefSeq) KH domain-containing protein At3g08620 isoform X1
KO
K14945
protein quaking
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110605827
Spliceosome [BR:
mesc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110605827
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
110605827
NCBI-ProteinID:
XP_021600168
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Position
18:14238417..14242579
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AA seq
282 aa
AA seq
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MSGLYAQNFSPSRTLSPHIRTTPDVDSGQYLAELLEEHQKLGPFTRVLPICSRLLNQEIL
RVSGMIPNLGLSDFDRLQRGSLSPMASSDLLPNNRSTGIIGWNGLPHEQRLGMQGMNVDW
QAAPASPSSYVVKKILRLDIPVDSYPNFNFVGRLLGPRGNSLKRVEASTGCRVYIRGKGS
IKDLEKEESLRGRPGYEHLSDSLHIIIEAELAVNIIDMQMRQAQEIIEELLKPVDESQDI
YKRQQLRELAMLNSNYREESPVPSGGVSPFNSSGMKRAKTGQ
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcttgtatgcacagaatttttcgccttcaagaactctgtctccacatataaga
acaacccctgatgttgatagtggtcagtatttggctgagctgcttgaagagcatcagaag
cttggaccttttactcgagttcttcctatatgtagccgacttttgaatcaagaaatattg
cgggtttctggaatgatccccaacctggggttaagtgactttgataggctgcaacgtgga
agcttgagccctatggcttcttctgacttattgccaaataatagaagcacggggataatt
gggtggaatgggctgccacatgagcagagattaggaatgcaggggatgaatgtggactgg
caagcagcaccagcaagcccaagttcctatgttgtgaagaaaatcttgcgtttggatatt
cctgttgatagctatccaaatttcaattttgtaggccggcttttgggtcctaggggcaat
tcgttgaagcgagttgaagcttctacagggtgtcgcgtgtatattagaggaaaaggttca
ataaaagacctagaaaaggaagagtcattaaggggaagaccaggctatgagcatctgagt
gattctctgcacattataattgaggctgagttagctgtcaacattattgatatgcaaatg
agacaagcacaagaaatcattgaagaactgcttaaacctgtggatgaatcacaggatatc
tacaagaggcaacagctgagagaattagcaatgttgaattctaactatagagaagagagc
cctgtaccaagtggcggcgtctctcctttcaactcgagtggaatgaagcgtgcgaaaacc
ggccaatag
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