Manihot esculenta (cassava): 110605900
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Entry
110605900 CDS
T05761
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110605900
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110605900
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110605900
NCBI-ProteinID:
XP_021600272
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Position
18:complement(4846376..4848448)
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AA seq
378 aa
AA seq
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MAVQWFALALCMAFFFFFAPDFCLAQKMNPIDSCWRQNPNWRRNRQQLATCSVGFAGKMT
NNIGKDVIRYKVTDPRDDPLNPKPGSLRYGATMITGKVWITFQKNMNIELVKPLLISSFT
TLDGRGVDVHITGNACLLVYKATDVIIHGLRIHHCMAVGPSSVRGPNGEMVALGKMDGDA
IRLVTASKVWIDHNTLYACQDGLLDVTRGSTHITISNNWFKDQDKVMLLGHDDGYLRDKD
MKVTVVFNHFGPNCNQRMPRVRHGYAHVANNLYQGWEQYAIGGSMNPSIKSESNYFIAPK
SGNKEVTWRQGVNVKSRPWNFYSVRDVFENGASFTQSGVGGAKPNYNNQERFEVADAKSV
KSITSSSGALKCFRTIMC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggccgtacaatggttcgctttggctctttgcatggccttcttcttcttcttcgcccct
gatttttgtcttgctcaaaagatgaatcccattgatagttgctggagacagaaccctaat
tggcgaagaaacaggcagcaattagccacctgctccgtggggtttgcagggaagatgact
aacaacattggaaaagatgtcatccgctacaaagtgactgatcctagagatgacccattg
aaccccaaaccagggtctctgagatatggagccacaatgatcaccggcaaagtgtggata
acttttcaaaagaacatgaatattgaacttgtaaagccccttctcatcagcagtttcacc
accctcgatggccgaggcgtcgacgttcacattactggaaacgcttgccttctagtctac
aaggccaccgacgtaatcatccatggcctgaggattcaccattgcatggccgtaggtcct
agctcggtgaggggaccaaatggagagatggtggctttaggtaagatggatggggatgca
atcaggttggtcaccgcatcaaaagtctggatcgaccacaatactctatatgcatgccaa
gatggtcttctggatgtgactcgaggatctacacacatcaccatctctaacaactggttc
aaggaccaagacaaggtcatgcttcttggacatgacgatgggtacttgagagacaaggac
atgaaggtgactgttgtgttcaatcattttggtccaaattgcaaccagcgtatgccgagg
gttcgtcatggatatgcacacgtagccaacaacctctaccaaggatgggaacaatatgca
attggaggaagcatgaatcctagcatcaagagtgaatccaattacttcatcgcaccaaaa
tcaggaaacaaagaggtaacatggagacaaggggttaatgtgaaaagcaggccctggaac
ttctattcggtgagggatgtttttgaaaatggtgcttctttcacccagagcggtgtcgga
ggggcaaagcccaattacaacaaccaagagaggttcgaggttgcagatgcaaagtctgtc
aagtctataacaagctcatcaggtgctttaaagtgctttagaaccattatgtgctga
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