Manihot esculenta (cassava): 110605945
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Entry
110605945 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170 isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110605945
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110605945
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110605945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_2
zf-MIZ
NOA36
Motif
Other DBs
NCBI-GeneID:
110605945
NCBI-ProteinID:
XP_021600328
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All DBs
Position
18:10437098..10447705
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AA seq
162 aa
AA seq
DB search
MDGPPANDWCSVCHGRFRVPCQANCSHWFCGDCIMLVWHHGSAIQPWKCPLCRRQITLLV
PGETSQREHHNPEVAEILQKVQAYNRLFGGQTSGLFQNQVVGVFGIVFFLGQLVMKLGVI
SNTDTRTHAQIAIEVEKGWRRTGLIGDIRSYSNNNHQALLPN
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcctccggcgaacgattggtgctctgtttgccatggacgcttcagggtcccc
tgccaggccaattgctctcattggttttgcggtgattgcattatgcttgtttggcatcat
ggatctgcaattcaaccttggaaatgcccactatgtcgtcgtcaaattacattgttggtc
cctggtgaaacttcacaaagggagcatcataaccctgaggttgctgagattttgcaaaag
gttcaagcttataatcgtctttttggtggacaaactagtggtctctttcagaaccaagta
gttggagttttcggcattgtcttcttccttggacagctagttatgaagttgggagttatc
tcaaacacagacacacgcacacatgcacaaatagcaatagaagtagaaaaagggtggaga
agaacagggctgattggtgatattagatcatacagtaacaacaaccaccaagccttactt
ccaaattag
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