Manihot esculenta (cassava): 110606029
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Entry
110606029 CDS
T05761
Name
(RefSeq) F-box/LRR-repeat protein 3 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110606029
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110606029
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_8
LRR_NXF1-5
LRR_RPS2
F-box
Motif
Other DBs
NCBI-GeneID:
110606029
NCBI-ProteinID:
XP_021600437
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All DBs
Position
18:27826124..27830830
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AA seq
651 aa
AA seq
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MQAPLFNCFDFLTEEIIFIILDHLNNDPFAQKSFSLTCKAFYSIESRHRRTLKPLRAELL
PRILHRFPCIDRLDLYHCPSIEDSTLNVISQACKATLLSINLSKSRSFSNVGLSSLVLSC
SNLVEIDLSNGVKLNDLAAAAIAEAKNLEKLWLARCKLITDMGIGCIAVGCRKLRLICLK
WCLKIGDLGVELIALKCKEIRNLDLSYLPITEKCLSSIMQLDHLEDLVLEGCLGIDDDGL
STLQQTFKSLKTLNMSNCQNVTHVGFLSLTNGAKNLQELSLAFGFAVTRDLAKCLHTFSG
LQSIKLDGCLVTCSGLEAIGNCHHSFKELSLSKCSGVTDESLSFLVKSHKDLRKLDITCC
RKITYDSINNITSSCTSLTSLRMESCSLVSRKAFVLFGQRCQLLEELDVTDNEIDDEGLE
SISRCTKLFSLKLGICLNITDDGLRYIGSSCSKLKDLDLYRSTGITDVGITAVAVGCPAL
EIINLAYNDKATDASLRSLSTCLNLRALEIRGCRRVSSEGLSAIATGCRKLMVLDLKKCF
NINDNAMLPLAQFSKNLKQINLSYCSVTDVGLLALTGFNCLQNMTILHLRGLTPNGLAAA
LLACGGLTKVKLQASFKPLLPKHLLNFMEARGCLFQWRDKAFQVEMDPKGW
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcacccctcttcaattgttttgatttcctcacggaggagatcatatttataatc
cttgaccatcttaacaacgacccatttgcccaaaaatctttctctttaacctgtaaggct
ttctactccatcgaatctcgccaccgcagaacacttaagccacttcgagccgagctcttg
ccgagaattcttcatcgcttcccctgtattgaccgtctcgatctgtaccattgtccttcc
attgaggatagtacgttgaacgtgatttcacaggcatgtaaagctactttgctttctata
aacctgtcaaaatcgaggtctttctcaaatgttgggttatcaagcttggttttgagctgt
tccaatttggttgagattgacttgtctaatggagtaaagttgaatgacttggctgcagcc
gcaattgcggaggctaagaatttggagaagttgtggttggcgaggtgtaagttgatcaca
gatatgggaattgggtgtattgcagttgggtgtagaaagttgagattgatttgcttgaag
tggtgtctaaagattggtgatcttggagtggagttaattgctttgaaatgcaaggagatt
aggaatttggatctctcgtacctaccgatcacagagaaatgtctttcatctatcatgcaa
ctagatcatcttgaagatttggttcttgagggatgccttggtattgatgatgatggtctt
tcaacactccaacagactttcaagtcactcaagacacttaatatgtcaaactgtcagaac
gttactcatgtgggttttttgtctttgacaaatggtgcaaaaaacctccaagaactttct
ttagcttttggctttgctgttaccagagatctggcaaaatgcctgcatacattttcaggg
ttgcaatcaataaaattagatggctgtttggttacttgttctggccttgaagccattgga
aattgtcatcactcgttcaaggagctgagcttgagtaagtgctcgggagtgaccgatgag
agtctgtcctttctcgtgaaatctcacaaggatttgagaaagctggacattacatgctgt
cgcaagataacatatgattctataaacaacataactagttcatgcacttccctaacttca
ctcagaatggagtcttgtagcctggtttcacgcaaagcatttgtcttgtttggacaacgg
tgccaacttttggaggaattagatgtaacagataatgaaatcgatgatgaaggtctagaa
tcgatatcaagatgtactaaacttttcagtttaaagctggggatttgcttgaacataact
gatgacggacttagatatattggaagcagttgctcaaagcttaaagatctcgatttgtat
aggtctacagggataactgatgtgggaatcacagcagttgctgttggttgtcctgcactg
gagataattaacttggcttataatgataaagctacagatgcttcattgagatctttgtct
acatgtttgaatttaagagcacttgagatccgaggatgtcgtcgtgtatcatcagaaggt
ctgtctgccattgccactggctgtaggaagcttatggtgcttgacttaaagaagtgcttc
aacatcaatgataatgcaatgcttccccttgctcaattctccaagaacctgaaacagata
aacttatcatattgttctgttaccgatgttgggcttttggcactcaccggcttcaactgc
ctacagaacatgactatcttacacttgagaggtttaactccaaatggcctagcagctgct
ctattggcctgtggagggctgactaaggtgaagcttcaggcttcctttaagccattactt
cctaaacaccttcttaatttcatggaagctcgcggatgtttgtttcaatggagagataag
gcattccaggtggaaatggatcctaagggatggtag
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