Manihot esculenta (cassava): 110606095
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Entry
110606095 CDS
T05761
Name
(RefSeq) heat stress transcription factor B-4
KO
K09419
heat shock transcription factor, other eukaryote
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110606095
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
110606095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Motif
Other DBs
NCBI-GeneID:
110606095
NCBI-ProteinID:
XP_021600539
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Position
18:complement(3412210..3413805)
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AA seq
359 aa
AA seq
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MALMLDNCESILLSLDSHKSVPAPFLTKTYQLVDDPTTDHIVSWGEDDTTFVVWRPPEFA
RDLLPNYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPH
VAFNHQHHHHPHSPLGVNGPGFFPFSGRVSISPSESDEQPNNWCDSPPLSSPRGGEANAS
VINGGGYNSSVTALSEDNERLRRSNNMLMSELAHMRKLYNDIIYFVQNHVKPVTPSNSYP
SSLLLCSPTSTANPFASNGSLVQKPLNQLLGYYPPTNAKQIPQVQVLNSPSTTSQSTLTI
LEDSNTNGFKTKLFGVPLQSKKRLHPEYSSSTGNMEPSKARLVLENDDLGLNLMPPSAC
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggctcttatgctagacaactgtgaaagcatattgctgtcactagactcccataaatcg
gtcccagccccgtttcttactaaaacctaccaattagttgatgatcccaccaccgaccac
atagtatcttggggtgaagatgatacaactttcgttgtttggagaccgcctgagtttgcc
agagatctccttcctaactatttcaagcataacaacttctctagctttgtcagacaactt
aatacctatggttttaggaaggttgtacctgacagatgggagttcgcaaatgagtttttc
aagaaaggagagaagcatttgctctgtgaaatccatagaagaaaaacagctcagccacat
gtagctttcaatcaccagcaccatcaccacccacattctccgctgggtgttaacggacca
ggtttctttccattttcaggccgagttagcatctcgccttctgaatcagatgaacaaccc
aacaactggtgtgactcgccgcctctctcttcaccgagaggaggagaggctaatgcttca
gttattaatggtggtggatataacagctcggtaactgccttgtcagaggataacgagaga
ttaaggagaagcaataacatgctcatgtctgagcttgcacacatgagaaagctttacaat
gatattatctattttgtccaaaatcatgttaagcctgtgactccaagcaattcctatcct
tcttccttgcttctttgttccccaacatctactgctaacccttttgcttctaacggctct
ttggtacaaaagcctttaaaccagctccttggatattaccctcctactaacgctaagcaa
attcctcaggttcaagttttaaactctcctagcaccacttcacagagcactctgacaatt
cttgaagattccaacaccaatggcttcaagacgaagttgtttggtgtgcctctacaatcc
aagaaaagattgcaccccgaatattcttctagtaccggaaacatggagcctagtaaagct
cgtttggtgttagaaaatgatgatttagggttgaatctcatgccaccttcagcatgttag
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