Manihot esculenta (cassava): 110606443
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Entry
110606443 CDS
T05761
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110606443
Enzymes [BR:
mesc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
110606443
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
110606443
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
110606443
NCBI-ProteinID:
XP_021600937
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Position
18:10083565..10094499
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AA seq
617 aa
AA seq
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MEDIEDLLIGSGGGTPPGFRLPLNSVGVNPRKNKNKNKPNLNASILSQIPLSTKIPGTQT
IYIKTFGCSHNQSDSEYMAGQLSSFGYALTDLPEHADLWLVNTCTVKSPSQSAMDTLLAK
GKSAKKPLVVAGCVPQGSRNLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRRTLP
ALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVRTVIADGVKE
IWLSSEDTGAYGRDIGVNLPALLNAIVAELPSDSSTMLRIGMTNPPFILEHLKEIAEVLC
HPCVYSFLHVPVQSGSDSVLNAMKREYTVSEFRTVVDTLTELVPGMQIATDIICGFPGET
DDDFAQTVSLIDEYKFPQVHISQFYPRPGTPAARMKKVPSNIVKKRSRELTSVFEAFTPY
NGMEGRVERIWITEIATDGIHLVGHTKAYIQVLVVAPESMLGTSAIVKITSVGRWSVFGE
VIQALNQMDEKTVSSKKMPGQEKCSPCSDPFVTCACSKESEPCDCGPESCGGQNDVLLDN
RNRRNLIGWLLRKRKNQMHKKVENGIALGSLKKQEQTRENSSTWSIVDWALVGGMLVSLL
TIVVLLLHLSFRTISAK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatagaagatttattgattgggagtggaggtggtacccctcctggatttcgg
ttgcctcttaattctgttggagttaatccccggaagaataagaacaaaaacaaacctaac
cttaatgcctccattctatctcaaattcctttgtcaaccaagattcctggcactcagacc
atatatatcaagacttttggatgctcacataaccagagtgacagtgaatatatggctggt
cagctttcatcatttggttatgcattaactgaccttcctgagcatgctgacttgtggctg
gtcaatacatgcactgtaaaatctccaagtcagtctgcaatggacaccctattagcaaag
ggtaaaagcgcaaaaaaacccctggttgttgctgggtgcgtgcctcaaggtagtcgaaat
ttgaaagaactagaaggagtcagtatagttggtgtgcagcaaatagaccgtgtagttgaa
gttgtggaagagactctaaaaggtcatgaggtgcggcttttgaaccgcaggacattgcct
gcactagatttgccaaaggttcgcaagaacaagtttgttgagattcttccaattaatgtt
ggttgcttgggagcttgcacttattgcaagacaaagcatgcccgtggtcatctagggagc
tatactattgacagccttgtgggtcgtgtaagaacagttatagctgatggagtcaaagaa
atatggttgagcagtgaagatactggagcatatgggcgtgacattggggttaatcttcca
gctttattaaatgctattgttgctgaacttccatctgattcaagcaccatgcttcgaatt
gggatgacaaatcctccttttattcttgagcacttgaaagagatagcagaagttttgtgt
cacccatgtgtgtactctttccttcatgtgcctgtgcaatctgggagcgattctgttttg
aatgccatgaaacgagagtacactgtgagtgagttcaggactgtggtagataccttgact
gaactagttccagggatgcaaattgctactgacataatatgtggattcccaggtgaaacg
gatgatgattttgctcaaactgtcagcctcattgacgagtacaaattccctcaagttcat
atatcacagttttatcctagaccaggaactcctgctgctaggatgaagaaagtcccgagt
aacatagtgaagaaaaggagccgtgaattgacttctgtttttgaagctttcactccatat
aatggaatggagggtagagtggaaagaatatggataactgaaatagcaactgatggaatt
cacctggttggccatacgaaggcatacattcaggtgcttgtagttgctccagaaagcatg
ctgggtacttcggctattgttaagataacatctgttggaaggtggtctgtttttggcgaa
gtgattcaagctctcaaccaaatggatgaaaaaacagtttccagtaaaaaaatgcctggt
caagaaaaatgttctccctgctccgacccatttgtaacttgtgcatgttcaaaggaatca
gagccttgcgattgtggaccagaaagctgtggaggacagaatgatgtgctactggacaac
cgaaatagaagaaatctgattggatggttattgaggaagaggaaaaatcaaatgcacaaa
aaggtggagaatgggattgccttgggatccttgaaaaagcaagagcagacaagagaaaac
tcgagtacatggagcattgtcgattgggctcttgtaggaggaatgctggtcagcttattg
acaattgtagttctactattgcatcttagttttaggaccatttctgccaagtga
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