Manihot esculenta (cassava): 110606502
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Entry
110606502 CDS
T05761
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110606502
Spliceosome [BR:
mesc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110606502
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
TGF_beta
Motif
Other DBs
NCBI-GeneID:
110606502
NCBI-ProteinID:
XP_021601027
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All DBs
Position
18:8647238..8654397
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AA seq
444 aa
AA seq
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MAELSKVIHVRNVGHEISENDLLQLFQPFGIITKLVMLRAKNQALLQMQDVASAMNALQF
YSNVQPTIRGRNVYVQFSSHQELTTMDQNSQGRGDEPNRILLVTIHHMLYPITVEVLHQV
FSPHGFVEKIVTFQKSAGFQALIQYQLRQSAVAARTSLQGRNIYDGCCQLDIQFSNLDEL
QVNYNNDRSRDFTNPHLPSEQKGRSSQQAGYGDVGVAYPQVGIAQVAMANAAAIAAAFGG
GLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLHNKPDHALVQMGDG
FQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYSNSNLNRFNRNAAKNYKYCCS
PTKMIHLSTLPQDITEEEIVSHLEDHGAIVNTKLFEMNGKKQALVLFETEEQATEALVCK
HASSLAGSIIRISFSQLQSIRETS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcagaactttccaaagtcatccacgtacgcaatgtggggcatgaaatttctgaaaat
gatttgcttcagttattccagccatttgggatcataacaaaacttgttatgcttcgtgct
aaaaatcaggctctcctccaaatgcaagatgttgcttcagccatgaatgctctgcaattc
tactcaaatgtccagccaaccataaggggtagaaatgtttatgtccaattctcatcgcat
caggaactaaccacaatggatcaaaattctcaaggacgaggagatgagccaaatcgcatt
cttttagttacaatccatcacatgctatatcctattactgtggaagtgctgcatcaagtt
ttttctccccatggatttgtggagaagatcgtcacatttcagaagtcggctggttttcaa
gctcttattcagtatcagttgcgccagagtgctgttgcagctaggacttctcttcaggga
cggaatatttatgatggttgctgtcagctggacattcagttttcaaacttggatgagttg
caagtgaactacaataacgatcgatcaagggatttcactaacccacatctaccttctgaa
cagaaaggcagatcttcacagcaggctggatatggtgatgtaggagttgcatatccacag
gtgggtattgctcaggtcgcgatggcgaatgcagctgcaattgctgctgcctttggtgga
ggtttgcctcctggaattagtgggacgaatgataggtgtacagtccttgtatccaattta
aatcctgatagaatagatgaagataagctttttaacctgttttccctctatggaaacatt
gtgaggattaagcttctccacaataaaccagatcatgcacttgttcagatgggggatggt
tttcaggctgaattggcggttcatttcctgaagggtgcaatgcttttcgggaagcggctg
gaggttaacttttctaagcatccaaacataactcaaggtgctgatacacatgagtacagc
aactccaatctcaatcgcttcaaccgaaatgctgcaaagaactacaagtactgctgctca
ccaacaaagatgatccacctttccactcttcctcaggacatcactgaagaggagatagtg
agccatttggaggatcatggtgccattgtcaacactaaactctttgagatgaatgggaag
aagcaggcccttgttctgtttgaaactgaggagcaggccactgaagccctcgtgtgcaaa
catgcgagttcacttgctgggtcaataatccggatttccttctcccagctacaatcaatt
agagaaacctcatag
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