Manihot esculenta (cassava): 110606518
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Entry
110606518 CDS
T05761
Name
(RefSeq) protein argonaute 4 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110606518
03036 Chromosome and associated proteins [BR:
mesc03036
]
110606518
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110606518
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110606518
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
110606518
microRNA pathway
RISC loading complex
110606518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
THF_DHG_CYH
Motif
Other DBs
NCBI-GeneID:
110606518
NCBI-ProteinID:
XP_021601057
LinkDB
All DBs
Position
18:complement(13049926..13056364)
Genome browser
AA seq
909 aa
AA seq
DB search
MDSIEPEKNGSQQDLPPPPPVVPPNLVPLKVETEPVKKKPARVPIARRGFGSKGQKISLL
TNHFKVNVTNVEGYFYHYSVSLSYEDGRPVDGKGVGRKVIDRVQETYDSELDGKNFAYDG
EKSLFTIGSLPRNKLEFTVVLEDVTSNRNNGNASPEGHGSPNESDRKRLRRPYHSKTFKV
EISFAAKIPMQAIANALRGQESENSQEAIRVLDIILRQHAAKQGCLLVRQNFFHNDPRNF
ADVGGGVLGCKGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNARDPFQLDWA
KAKRTLKNLRIKASPSNQEYKITGLSDKPCREQMFQLKQKRDGDGEPLELTVYDYFVNHR
HIDLRYSADLPCINVGKPKRPTYIPIELCTLVSLQRYTKALNTLQRASLVEKSRQKPQER
MSTLTNALKSSKYDAEPMLRSCGISISTNFADIEGRVLPAPRLKVGNGEDFFPRNGRWNF
NNKKLVEPSKIERWAVVNFSARCDVRSLVRDLTRCADMKGIPMEAPFDVFEENPQFRRAP
PTVRVEKMFEEIQSKLPGAPKFLLCLLPERKNSDIYGPWKKKNLAEFGIVTQCLAPQRVN
DQYLTNLLLKINAKLGGLNSMLSVEHTPSIPVVSKVPTIILGMDVSHGSPGHSDCPSIAA
VVSSRNWPLISRYRASVRTQSPKVEMIDSLYKRVSETEDEGMIRELLLDFYTSSGKRKPD
QIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWNPKFVVIVAQKNHHTKFFQKGSPD
NVPPGTVIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSADDLQDLVHSLSY
VYQRSTTAISVVAPICYAHLAATQMGSFMKFEDTSETSSSHGGVTSAGAVPVPQLPKLQD
KVCNSMFFC
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggattcgattgagccggagaaaaacgggtcacagcaggatttgcctcctcctccaccg
gttgttccaccgaatttagttccgctcaaagtagagactgagccggtgaagaagaagcct
gctagggttccgatagctaggcgtgggtttggatctaaaggacagaagatttctcttctt
accaaccactttaaagtgaatgtgaccaatgttgagggttacttttaccattatagtgtg
tctctctcatatgaagatggtcgtcctgttgatggaaaaggcgttgggaggaaggtcatc
gatcgagttcaggagacttacgattctgagttagatggaaagaactttgcatatgatggg
gagaagagtttattcactattggttctcttcctcgcaacaagcttgagttcaccgttgtg
cttgaggacgtcacgtctaacagaaacaatggaaatgcaagccctgaaggtcatggtagt
cctaatgagagtgatcggaaaaggttgcggcgaccatatcattctaaaacgttcaaggtc
gagatcagttttgctgcaaaaatacccatgcaagccattgcaaatgcgcttcgggggcag
gagtcggagaactctcaagaagccataagggttctggacatcatattgcgtcagcatgca
gctaaacagggttgcctccttgttcgccagaacttttttcacaatgatccaaggaatttc
gcagatgttgggggtggtgttctgggttgtaaagggtttcactcgagttttagaaccact
caggggggcttatctctgaatattgatgtatctacaaccatgataattcagcctgggccg
gttgtggattttctaattgccaaccaaaatgcaagagacccctttcaacttgactgggct
aaggcaaaacgaactcttaaaaacctgaggatcaaagctagcccctcgaaccaggagtac
aagataactggtctgagtgacaaaccatgcagagagcaaatgtttcaacttaaacaaaaa
agggatggggatggtgaacctctggaattaactgtttatgactattttgttaatcatcgt
catatagatttgcgctattctgctgatttgccttgcattaacgttgggaagccaaagcgc
cctacttatattccgattgagctttgtactttggtgtccttgcaacgatacacgaaagca
ctcaatactctccaaagagcttccctggtggagaaatcaaggcaaaaaccccaagagagg
atgagtactttaacaaatgctcttaaaagcagcaaatatgatgctgaacctatgctacgt
tcttgtggcatttcaatcagtactaattttgctgatattgaaggccgtgttttgcctgct
ccaaggctaaaagtaggcaatggggaggatttctttccccggaatgggcggtggaatttt
aataacaagaaactcgtggagcctagtaagatagaaagatgggctgttgtgaacttctca
gcgcgatgtgatgttcgtagccttgtaagagaccttacaagatgtgcagatatgaaagga
attcctatggaggctccctttgatgtatttgaggagaatccacagtttaggcgagctcca
cctacagttagagtggagaaaatgtttgaggagatacagtctaaacttcctggtgccccc
aagttcctattgtgtttactcccggagaggaaaaactcagatatatatggcccttggaag
aagaaaaatcttgctgagtttggaattgtcacccagtgcctggctcctcaaagggtcaat
gaccagtatctgactaatcttctgttgaagatcaatgcaaagcttggtgggttaaattct
atgttatcagttgaacatactccttctattccggttgtttctaaggttcctacaatcata
cttgggatggatgtatcacatggctctcctgggcattctgattgcccgtccattgctgcg
gtggtcagttccaggaattggccattgatttctcgttacagggcatcagttcgcactcag
tctccaaaggtggaaatgatagactctctatacaaacgagtgtcagaaactgaggatgaa
ggaatgattagggagcttctgttggatttttataccagttcaggtaaaaggaaaccagat
cagatcatcatattcagggatggtgtaagtgaatctcaatttaatcaagtattgaatatt
gaactggatcagataattgaggcatgcaagtttcttgatgagaaatggaaccccaagttt
gtggtgattgtagctcagaagaaccaccatacaaaattcttccaaaagggatctcctgat
aatgttccacctggtactgtcatagacaataaagtctgtcatccaaggaacaatgatttc
tatctctgtgctcatgcaggaatgattggtactacaagacccacacattaccatgtttta
ttagatgaggttggcttttcagcagacgatcttcaggacctagtgcattctctatcatat
gtttatcaaagaagtacaactgccatttctgtagttgcgccaatatgctatgctcacctg
gctgccacccagatgggatcgttcatgaagttcgaagacacttctgagacgtcatcgagt
cacggtggtgtaacctctgctggagctgttcctgtgcctcagctgcccaaattgcaggat
aaagtatgcaattctatgttcttctgttga
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