Manihot esculenta (cassava): 110606651
Help
Entry
110606651 CDS
T05761
Name
(RefSeq) WD repeat-containing protein 36 isoform X1
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110606651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110606651
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110606651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_VPS8
NBCH_WD40
PEP5_VPS11_N
Beta-prop_LRRK2
WD40_like
WD40_RFWD3
WDCP
Nbas_N
Beta-prop_RIG_1st
VPS8_N
Beta-prop_NOL10_N
Beta-prop_IP5PC_F
RNA_pol_Rpb4
Utp12
Motif
Other DBs
NCBI-GeneID:
110606651
NCBI-ProteinID:
XP_021601252
LinkDB
All DBs
Position
18:14348821..14363709
Genome browser
AA seq
908 aa
AA seq
DB search
MGIFEPYRAIGYITSSVPFSVQRLGTETFVTVSVGKAFQVYNCAKLNLVLVSPQLPKKIR
ALASYRDFTFAAYGNHVAVFKRAQQVATWSRHSAKVNLLLLFGDHILSVDVDGNMFIWGF
KGLEQNLAPIGHIMLDNRFTPTCLMHPDTYLNKVVLGSQEGTLQLWNISTKKKLYEFKGW
NSSITSCVSSPALDVIAIGCADGKIHVHNIRCDEELVSFSHATRGAVTALCFSTDGQPLL
ASGGSSGVISIWNLEKRRLQSVIKEAHDNSIISLHFFANEPVLMSASADNSIKMWIFDTS
DGDPRLLRFRSGHSAPPHCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVSKR
AKKLKVKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILRPC
PENPTPVKACAISACGNFAVVGTAGGWIERFNLQSGISRGSYLDVSEGRSCAHEGEVVGV
ACDSTNTLMISAGYHGDVKVWDFKGRELKSRWRVGCSLVKTVYHRLNGLLATVADDLVIR
LFDVEALRMVRKFEGHTDRVTDLSFSEDGKWLLSSSMDGSLRIWDVILARQIDAICVDVP
ITALSLSPNLDILATTHVDQNGVYLWVNQSMFSGTSVVDSYASGKEVVSVKLPSVSSMEG
SQVQDSDRPIVKHPQHDEASVLPTFSHQIPELVTLSLLPRSQWQGLINLDIIKVRNKPVE
PPKKPVNAPFFLPSLPSLSGEVLFKPSEPMNEEKETKTDEVQNNDRKLDRTTYQFLQLLQ
SSAKMKNFSTFTDYIKALSPSTLDMELRLLQIIDEDDQQELEKRPEFISIELLLDYFIHE
IASRNNFEFVQAVIRLFLKIHGETIRCQPKFHEKAGKLLETQREVWQRMDNLFQSTRCMV
TFLSNSQF
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggggatatttgaaccctacagagcaattggatacataacaagcagtgttcccttctcc
gttcagcgactaggcactgaaacttttgtcacagtgagtgtaggcaaagcttttcaggtt
tacaactgcgccaagctgaatttggtccttgttagtccacagcttcccaaaaagattcga
gctcttgcttcctatcgcgatttcacctttgctgcctatggaaaccacgtagccgttttt
aagcgcgctcaacaggtagcaacttggagtaggcatagtgctaaagttaatttgttgttg
ctgtttggtgatcacatcttgagtgtagacgttgatggtaatatgttcatttggggtttc
aaaggacttgagcagaatctagctccaattggacacatcatgctagataatagatttaca
cccacctgcttaatgcacccagatacttacctaaacaaggttgttcttgggagccaagag
ggtactttgcagctttggaacatcagcactaagaagaagctttacgagttcaagggatgg
aattcctctatcacaagttgtgtctcatcacctgcacttgatgtcattgcaattggttgt
gctgacgggaaaattcatgtacataacattcgctgtgatgaggagttggtttccttttct
catgctacaaggggcgcggtaactgccttgtgttttagtactgatggacagcctcttcta
gcatctggaggttcatctggtgtcattagcatatggaatcttgagaaaagaaggctccaa
tcagtcataaaagaggctcatgataattcaattatttcattgcacttttttgctaatgag
cctgtattgatgagtgcatcagcagacaactcgattaaaatgtggatttttgacacaagt
gacggagatcctcgcctgttgcgctttcgaagcggacacagcgctcctcctcattgcata
aggttctatgcgaatgggagacacattctatctgctggtcaggatcgtgccttccgtctt
ttctccgtcatccaggatcagcaaagtagagagctttcccagcgtcatgtatctaagcgt
gccaagaaactgaaagtgaaggaagaagaattgaaattgaagcctgttattgcatttgat
tgtgctgaaattagggagcgggattggtgcaatgtggttacatgtcatatggatactgca
caggcgtatgtatggaggcttcagaattttgtccttggtgagcatatcctgagaccttgc
ccagaaaatccaacacctgttaaggcctgtgctattagtgcatgtggtaattttgctgta
gtagggacagcaggtggttggatagagaggttcaatcttcaatcggggatcagccgtggc
agttacctagatgtgtcagaaggaagaagctgcgcccatgaaggagaggtggttggagtt
gcttgtgattcaacaaataccctgatgataagtgcaggataccatggagatgtaaaggtt
tgggatttcaaaggacgggaactaaaatcgagatggagagttggctgttctctggttaaa
actgtttatcatcgtctcaatggtcttttggctactgtggcagatgatttggttattcgt
ttgtttgatgtcgaggcattgagaatggttcgcaaatttgaaggtcatactgatcgtgtc
acagatttatcttttagtgaggatgggaaatggcttttatcctccagtatggatgggagt
cttagaatttgggatgtgatcttagccaggcaaatagatgcaatatgcgttgatgtgcct
attacagcattgtctctgtcaccaaatttagatatattagcaacaactcatgttgatcaa
aatggtgtgtatttgtgggttaatcaatcaatgttctctgggacctcagttgttgattca
tacgcaagtgggaaagaagttgtgagtgtcaaattgccatctgtctcttcaatggaaggt
tctcaagttcaggactctgatagacctattgtgaagcacccacaacatgatgaagcttcc
gtcttgccaactttcagtcatcaaatcccagaacttgtaactctctcattgttgcctaga
agccaatggcagggtttgatcaacttggacattataaaggtgcgcaacaaaccagttgag
cctcctaagaagcctgtgaatgctcctttcttcttgccttcattaccatccctttctgga
gaagtattatttaaacctagtgagccgatgaacgaggagaaagaaacaaaaactgatgaa
gtgcagaacaatgatagaaaactagacaggacaacataccaatttttacaactccttcag
tcctctgccaagatgaaaaatttttctacgtttactgattatatcaaagccttgtctcca
tcaactttggacatggagctccgactgctgcagataatagatgaggatgatcagcaagag
cttgaaaagagacctgagtttatatcaattgagctgctgcttgattatttcattcatgag
atagctagcagaaacaattttgagtttgtgcaagctgttattagattgtttttgaagata
cacggggaaaccatacgctgccaaccaaaatttcacgaaaaggctggaaagctgctagaa
acccaacgtgaagtttggcagagaatggacaatttatttcagagcactagatgcatggtc
actttcctaagcaattctcagttctaa
DBGET
integrated database retrieval system
