KEGG   Manihot esculenta (cassava): 110606678
Entry
110606678         CDS       T05761                                 
Name
(RefSeq) F-box protein SKP2A
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110606678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mesc04121]
    110606678
Ubiquitin system [BR:mesc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     110606678
SSDB
Motif
Pfam: LRR_6 DUF7885 LRR_4 LRR_At5g56370 F-box-like F-box LRR_Zer-1 LRR_8 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 110606678
NCBI-ProteinID: XP_021601291
LinkDB
Position
18:7880811..7885314
AA seq 379 aa
MVGEAKLRSEDLNQCFERLMMVGGGNSAIAGGISHGGVKLEGVVITEWKDIPMELLLRIV
SLVDDRTIIMASGVCSGWRDAICLGLTHLCLSWCKNNMNNLLLSLAPKFTKLETLVLRQD
KQQLEDNAVEAIASYCHDLQDLDLSKSSKLSDRSLYALAHGCPNLTKLNISGCTAFTDGA
LEYLTRFCRKLKSLNLCGCVNAATDRALQAIGQKCSELQSLNLGWCENVGDLGVMSLAYG
CPDLRTLDLCGCVYITDDSVIALAYRCLHLRSLGLYYCRNITDRAIYSLVHSRVKNKPPL
WQTMKGRSDEEGLRSLNISQCTALTPPAVQALCDSFPALHTCSGRHSLVMSGCLSLTSVH
CACAVQAHRTMSYIPNQAH
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggtgggtgaagctaaattgaggagtgaggacttgaaccagtgttttgagaggctgatg
atggttggcggtgggaatagtgcgattgctggtggaattagtcacggaggagtgaaattg
gagggagtggtcatcactgagtggaaagatatccctatggagcttttgctgcggattgtt
tctcttgttgatgatcggaccattattatggcttctggggtttgtagtggttggagggac
gctatctgtttgggcctaacccatctctgtctctcttggtgcaaaaacaacatgaacaac
ttgcttctatctctggctcctaaattcacaaaactggaaactctagtactgcgacaagat
aaacaacaacttgaggataatgctgttgaggctattgcaagctactgtcatgatttgcaa
gatctagatctcagcaaaagttctaagcttagtgatcgttctctatatgcattagctcac
ggttgtcccaaccttactaaactcaatatcagtgggtgtacagcatttacagatggtgct
cttgaatatctgactcgattttgccgaaaattaaaatctttgaatctttgtggatgtgta
aatgctgcaactgaccgtgctttgcaggctattggacaaaaatgcagtgagttgcaatct
ctgaatctgggatggtgtgagaatgtgggtgatcttggagtaatgagcttagcatacgga
tgtcctgatctcagaactcttgatttatgtggatgtgtctatataacagacgatagcgtg
attgctttggcatacagatgtctccatttgagatcccttggtctgtactactgtcgaaac
atcacagatagagccatctattcactggtgcatagccgagtgaagaacaaacccccactg
tggcaaaccatgaagggcaggagcgatgaggaaggtttaaggagtctcaacatcagtcaa
tgcacagcactcacccctcccgccgttcaagcactttgcgactcatttcctgcacttcac
acctgctcaggtaggcattctcttgtcatgagtggctgtttaagcttgacatcggtgcac
tgtgcctgtgcagtccaagcacaccgcacaatgagttatattcctaatcaagctcattaa

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