Manihot esculenta (cassava): 110606820
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Entry
110606820 CDS
T05761
Name
(RefSeq) protein transport protein SEC23 isoform X1
KO
K14006
protein transport protein SEC23
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110606820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110606820
Membrane trafficking [BR:
mesc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110606820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
110606820
NCBI-ProteinID:
XP_021601504
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Position
2:complement(9020894..9029919)
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AA seq
761 aa
AA seq
DB search
MTEFLDLESQDGVRMPWNVLPGTKQEASNCVVPVSAIYTPIKRFPDLPVLPYDPLRCRTC
RSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDDNLPAELFPQYTTIEYETPAEKS
SSSSVFMFVVDICIIEEEMAFLKSALSQAIDLLPDNSLVGLITFGTFVHVHELGFGQIPK
TYVFKGSKDVSKDQLLDQMGFFLKKPKPPTGVIAGARDGLSSESISRFLLPASECEFTLN
SVLEELQKDPWPVPSDQRATRCTGTALSVAASLLGACVPGSGARIMAFIGGPSTEGLGAI
VSKDLSEPIRSHKDLDKDSDPHYHKAVKLYEGLSKQLVHQGHVLDLFACALDQVGVAELK
VAVEKTGGLVVLAESFGHSVFKDSLRRIFQSDDYDLGLSSNGVFEINCSKDIKIQGIIGP
CSSLEKKGPLCSDTVIGQGNTSAWKMCGLDKATTLCIIFEIVKKDGPDVSIQPSSNQFYF
QFLTYYQHSSGQMRLRVTTLSRRWVAGSGSTQDLVAGFDQEAAAVAMARLVSFKMEIEAE
FDPIRWLDKALIHLCSRFGDYQKDSPSSFSLSPRLSIFPQFMFNLRRSQFVQVFNNSPDE
TAYFRIILNRENVANSVVMIQPSLISYSFHSGPEPALLDVAAIAADRILLLDSYFTVVIF
HGATIAQWRKAGYHNQPEHQAFAQLLQAPHDDAAVIIKERFPVPRLVVCDQHGSQARFLL
AKLNPSATYNSDAPLPGGDVLFTDDVSFEVFLDHLQRLAVQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgacggaattcctggacctggaatctcaggacggagtgagaatgccgtggaacgtgctt
ccgggcactaagcaagaggccagcaactgtgtggtacctgtctcagccatttacactccg
atcaagcgctttccagacttgccggtcctcccctacgatcccctccgttgccgaacctgc
cgctccgtccttaatccattctcaatcgtggatttcgcggctaagatctggatctgcccc
ttctgtttccaacgcaaccacttcccgcctcactacgcctccatcagcgacgacaacctc
cctgcggagctcttcccgcagtacactaccatcgaatacgagactccagctgagaagtcc
tcttcctcttcggttttcatgttcgtggtggacatttgcatcattgaggaggagatggcc
ttcctcaagtctgctttgtcccaggccatcgacctcctcccggacaattcccttgttggc
ctcatcacttttgggacctttgtccacgttcacgagctaggatttggccagatccccaaa
acttacgttttcaagggctccaaggacgtatccaaggaccagcttctcgatcaaatgggt
ttttttctgaagaagcccaagcctcctactggcgttattgcgggcgccagggatggcctc
tcttccgaaagcatttcgcgtttcctcttgcccgcctctgagtgtgaatttactctcaat
tcggtgttggaagagctgcagaaagatccttggcctgttccgtccgatcagcgggccacc
aggtgtactggcacggccctttctgtggctgccagcttgttaggagcttgtgttcctggg
tctggagctcgaattatggcattcattgggggtccatccactgaaggactcggtgctatc
gtgtcaaaggatctttctgaaccaattcgctctcacaaggacctggataaagattctgat
ccccattatcataaagctgtgaagctctacgaaggactttcaaagcagcttgtgcatcaa
ggccatgtacttgacctctttgcatgtgctcttgaccaggttggggttgctgaacttaaa
gttgcagttgaaaaaactggtgggcttgttgttcttgcagaaagctttggccattcagta
tttaaggactcacttagacgtattttccaatcggatgactatgaccttggactatcgtca
aatggtgtatttgagataaactgctcaaaggatattaaaattcaaggcattattggtcca
tgttcatcacttgaaaagaaaggtcctttgtgctctgatactgttatcggccaggggaat
accagtgcttggaagatgtgtggactagacaaagctacaactttatgtataatatttgaa
attgtgaagaaagacggtccagatgtttcaattcaaccctcaagcaatcaattttacttc
caatttttgacttattaccagcatagcagtggtcaaatgagactccgtgttacaacactt
tctagaagatgggttgctggatctggaagcacacaggatttggttgctggatttgaccaa
gaagcagctgctgtagccatggcacgcctagtctctttcaaaatggaaattgaggctgag
tttgacccaataaggtggctagataaagctttaatacatctatgttcacggtttggagat
taccagaaggacagcccatcttctttcagtttgtctcctcggctttcaatattccctcag
ttcatgtttaatttacggcgttcccaatttgttcaggtcttcaacaacagcccagatgag
acggcatacttcaggatcatattgaaccgggaaaatgtggcaaattctgttgtgatgata
caaccttcattgatatcttactcctttcattcagggccagaaccagctcttcttgatgtg
gctgccattgcagctgataggatcctgcttttggactcttattttactgttgttattttt
catggtgcaactattgctcagtggcgaaaagctggctaccataatcaaccagaacaccag
gcatttgcccaattgctgcaagcgcctcatgatgatgcggctgtgataatcaaggaaagg
tttccagttcctcgtttagtcgtttgtgatcaacatggttcacaggcccgtttccttctg
gcaaagttgaatccctctgctacatacaatagtgatgctcctcttccaggcggagatgta
ttgtttacagatgatgtcagcttcgaggtcttcttagatcatctccagagactagcagtt
cagtaa
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