Manihot esculenta (cassava): 110606912
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Entry
110606912 CDS
T05761
Name
(RefSeq) isoamylase 3, chloroplastic isoform X1
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00500
Starch and sucrose metabolism
mesc01100
Metabolic pathways
mesc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
110606912
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
110606912
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Isoamylase_C
DUF5696
Motif
Other DBs
NCBI-GeneID:
110606912
NCBI-ProteinID:
XP_043809511
UniProt:
A0A3S7HPI4
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Position
18:complement(5588197..5600955)
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AA seq
781 aa
AA seq
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MLRPLLPCDSTSAAKMRLFASPFSNNYTIAIVPSSAGHSHVLDMGLKLSKQASSSSGLRI
FSQGRDKHRTPSVYGRGARERVLEEKEASLMSETSPSFKIFPGQASPLGVSEVDKGINFA
IFSQHATSVTLCLSLPQRGVHERLVGNVIELALDPHVNKTGDIWHICIEDLPRSNVLYGY
RVDGPQNWNQGHRFDSNIILVDPYAKLVEGRRYFGDASLKLSKFLGTYDFDSSLFDWGDN
YKLPNIPEKDLVIYEMNVRAFTADKSSGLDPKIRGSYLGVIEKIPHLLELGVNAVELLPV
FEFDEFEFQRRPNPRDHMINTWGYSTINFFAPMSRYASGGGGPCNASREFKEMVKALHGA
GIEVILDVVYNHTNEADDQNPYTTSFRGIDNKVYYMLDPNSGQLLNFSGCGNTLNCNHPV
VMELILDSLRHWVTEYHVDGFRFDLASVLCRGTDGTPLSAPPVIRAIAKEPILSRCKIIS
EPWDCGGLYLVGKFPNWDRWAEWNGKYRDDMRRFIKGDSGMKGSFATRVAGSADLYSANK
RKPCHSINFVIAHDGFTLYDLVSYNFKHNDANGEGGNDGSNDNFSWNCGFEGETDDPSIK
ALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTSINNFQWGFLDKQRSS
HFRFFSEVIKFRLMHQVFRHENFLSNNEVTWHEDNWDNYESKFLAFTLHDSIGADIYLAF
NAHNYYVKVSIPPPPSKRRWFRVADTNLASPDDFVPEGVPGIENSYNVAPYSSILLEAKL
T
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcttcggccattacttccctgtgattccacttccgctgctaaaatgcgtctctttgct
tcaccattttctaataactacaccatcgctattgtcccttcttctgctggacattctcat
gttctggacatgggattgaagttgagtaaacaagcttcgagtagcagtgggcttcgaatt
tttagtcagggtcgtgataagcacagaacgcccagtgtttatggtcgtggtgctcgagaa
cgggtgcttgaggagaaggaagcgtctctaatgtcggaaaccagcccgtcttttaaaatt
ttccctggtcaggcatctccgttgggcgtatctgaagttgataagggaatcaattttgct
attttttcacagcatgccacttctgtcaccctttgcctatctcttcctcaaaggggagta
catgaaaggctagttggtaacgtgattgagctggccttggatcctcatgtgaataaaaca
ggagacatttggcatatctgtatagaggatttgcctcgtagcaatgtgctttatggttat
cgggtagatggtcctcaaaattggaatcaggggcatcggtttgacagtaatatcatactt
gtagatccttatgctaagctagttgaaggtcgtcgatattttggagatgctagccttaag
ttgtctaaatttcttggaacttatgattttgatagctcgctttttgactggggagataac
tacaagcttccaaatataccagagaaagatcttgttatctatgaaatgaatgttcgtgca
tttacggctgataaatctagcggcttagatccaaaaatacgtgggagttaccttggtgta
attgaaaagatcccacaccttctggagctgggtgtcaatgcagttgagttgctgcctgtg
tttgaatttgatgaatttgagtttcagagacgcccaaaccccagagatcacatgataaat
acatggggttattcaacaataaacttctttgctcctatgagtcgctatgctagtggtggt
ggaggaccttgtaatgcatctcgagaattcaaagaaatggttaaagccttgcatggtgcc
ggcattgaggttattttagatgtcgtctataatcatacaaatgaagcagatgaccaaaat
ccttataccacttcatttcgtggaatagataataaggtttattacatgttagacccgaac
agtggccagttgctgaacttttctggatgcgggaatacattaaactgtaatcatcctgtg
gtcatggagctcatccttgacagcctaagacactgggtcactgaataccatgtagatgga
tttcgatttgacttggctagtgtactttgtcgtggaacagatggcactccacttagtgct
cccccagttattagggcaattgccaaagaacctatcctatcaagatgtaaaattatttca
gaaccttgggattgcggaggcctttatttggttggaaaatttcctaactgggacagatgg
gccgagtggaacgggaagtaccgtgatgacatgagaagatttattaagggtgattctggt
atgaaagggagttttgcaacccgtgttgctggatctgctgacctgtacagcgcgaataag
cgcaaaccttgtcatagcattaattttgtaatagcacacgatggattcacactgtatgat
ctcgtttcttacaattttaagcacaatgatgccaatggagaaggtggaaatgatggaagc
aatgacaattttagttggaattgtggctttgaaggagaaactgatgatccttctattaaa
gctttacgctcccgccaaatgaaaaatttccatctggcattaatgatatctcagggaaca
ccaatgatgctaatgggggatgaatacgggcatactcgctatggtaataacaatagttat
gggcatgacacttctattaacaatttccagtggggatttttggataaacaaaggagcagt
cacttcaggttcttctctgaggtgataaagtttcgactaatgcaccaagtatttcgtcat
gaaaattttctcagcaataatgaagtgacatggcatgaagacaactgggacaattatgaa
agcaaattccttgcatttacgcttcatgacagtattggagcagatatctatttggcattt
aatgctcataactactatgttaaagtttcgataccccctccaccatcaaagaggcgttgg
tttcgtgtggcggacaccaatcttgcatctccagacgactttgttcctgaaggtgtccca
ggcattgagaattcctataatgtggctccatactcctcgattcttcttgaagcgaaactg
acatga
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