Manihot esculenta (cassava): 110606914
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Entry
110606914 CDS
T05761
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110606914
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110606914
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
110606914
NCBI-ProteinID:
XP_021601612
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Position
18:4834394..4844676
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AA seq
694 aa
AA seq
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MRKRLQRFFSSLGDCGGCLRHSNVSHSTSTSQRPRPGGILNPDRHFHLGKQTLKDNNCCT
MPPPAVRLYIQDHHVVMDNGIVQVTLSNPGGIVTGIRYNGIDNLLEVLNRETNRGYWDLV
WNPPGGKGIFDVISGTSFKVIVENEEQVELSFTRMWDPSLEGKYIPLNIDKRFILLRGSS
GFYSYAIYEHLKEWPGFELGETRITFKLRKDKFQYMAVGDNLQRLMPLPDDRMPGRCQTL
AYPEAVLLVNPKHPELKGEVDDKYQYSCNNEDNQVHGWISFNPPVGFWQITPSNEFRTGG
PLKQNLTSHVGPTTLAMFHSSHYAGKDLLPIYNPGEYWKKVFGPVFIYLNSASTGNDSLF
LWQDAKIKMMAEVQSWPYSFPASADFQKSAERGNVFGRLLVQDRYMSEDYIVASGAYVGM
APPGDVGSWQRECKDYQFWTRADENGCFFIKNIRTGDYNLYAWVPGFIGDYQFEAVVTII
SGCNIYMGDLVYNPPRDGPTLWEIGIPDRSAAEFYVPDPDPMHVNKLFINHPDRFRQYGL
WSRYVEIYPEADLVYTVGVSDHHKDWFFAQVVRRKDDGTHVGTTWQIKFKLDNVDQRNTY
KLRVALASATLAELQVRVNDPKAARPLFTTGLIGRDNSIARHGIHGLYWLYNVNIPGVRL
VEGENTVFLTQPRCTSPFQGLMYDYIRLEGPPSS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaaggctgcaaaggttcttcagttctcttggcgattgcggtggttgcctgcgc
cacagcaatgtttctcactctacgtccacttctcaaagacctagacctggaggtatactg
aacccagatagacattttcatcttggtaaacaaactctgaaagataacaactgttgcaca
atgccacctcctgcggtccgattgtatattcaagatcatcatgttgtgatggataatggc
atagttcaagtcacattatcaaaccctggaggaattgttactggcatacgatataatgga
attgacaatttgcttgaagttcttaatcgtgaaacaaatagagggtattgggatcttgtc
tggaatccaccaggaggcaagggaatatttgatgtgattagtggaacaagttttaaggtg
attgtggaaaatgaggaacaggttgagctctcattcacaagaatgtgggatccctctctg
gagggaaagtacattcccctaaacatagataaaaggtttatattgctccgtggttcctca
ggcttctactcttatgccatctatgagcacttaaaagagtggccaggttttgaacttggt
gaaaccaggatcactttcaagctcagaaaagacaagtttcagtatatggctgtaggagat
aacctgcaaagactgatgcccttacctgatgaccgtatgccaggaagatgtcaaaccctg
gcatatcctgaagctgtcctacttgttaatcctaagcatccagagctgaaaggagaggtg
gatgacaagtaccaatattcatgtaataatgaagacaaccaggtccatgggtggatatcc
ttcaacccacctgtggggttttggcaaattacaccaagcaatgagttccgaactggtggg
cccctcaaacagaacctgacctcacatgtaggccccaccacgcttgctatgtttcatagt
tcacattatgccggaaaagatctactgccaatatataatcctggcgagtattggaagaaa
gtttttggtccagttttcatctatcttaattctgcatcaactggaaatgactcacttttt
ctatggcaagatgccaaaataaagatgatggctgaagtccaaagctggccgtacagtttc
ccagcctctgcagatttccaaaagtcagcagaacgagggaatgtatttggtagactactt
gtccaagacaggtatatgagtgaggactatattgtagcaagtggtgcttatgtagggatg
gccccaccaggcgatgttggatcatggcagagagaatgcaaggactaccaattttggacc
agagcagatgagaatggctgtttcttcattaaaaacatcagaactggggactataacctt
tatgcatgggttcctggatttattggggattatcaatttgaagctgtcgttaccataatc
tcaggttgtaatatttatatgggtgatcttgtatataaccctccaagagatggacctaca
ttatgggaaataggcatccctgatcgttctgctgcagagttttatgttcctgatcccgat
ccaatgcatgtcaataaactatttatcaatcatcctgacaggtttaggcaatatgggttg
tggagcagatatgtggagatatatcctgaggcagacttggtttacacagttggtgtcagt
gaccatcacaaggactggttttttgcgcaagtggtgaggaggaaagatgatggtacacat
gtaggtaccacatggcaaattaagttcaaacttgacaatgttgatcaaaggaacacctac
aaattgcgtgtggcattggcatctgcaactctggcagaacttcaggttcgtgttaatgac
ccaaaagccgcccgccctttatttacaactggactaattggaagggacaactcgattgcg
agacatgggattcacgggctctactggctgtacaatgtaaatataccaggcgttcggtta
gttgaaggagagaataccgtcttcttgacgcagcccagatgcaccagccctttccagggt
ctcatgtatgactacattcgtctagaaggtcctccttcttcgtga
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