Manihot esculenta (cassava): 110607136
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Entry
110607136 CDS
T05761
Name
(RefSeq) probable ribonuclease P/MRP protein subunit POP5
KO
K03537
ribonuclease P/MRP protein subunit POP5 [EC:
3.1.26.5
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110607136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110607136
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110607136
03029 Mitochondrial biogenesis [BR:
mesc03029
]
110607136
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
110607136
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
110607136
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
110607136
Mitochondrial biogenesis [BR:
mesc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
110607136
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P_Rpp14
Pop8
Motif
Other DBs
NCBI-GeneID:
110607136
NCBI-ProteinID:
XP_021601903
LinkDB
All DBs
Position
18:complement(10692817..10697520)
Genome browser
AA seq
154 aa
AA seq
DB search
MVAFKNRYMVMEVFLDPNRDLVGDDPIIITQFNVSKAIKDSILVNYGECGLASSLGSLQV
KYVNPITKLCIIRASREDYQKVWSAITMVRSIGNCPVLFNLLDLSGSIKACRSAALKCDE
AKFAQYKLVVGDRLSEDVTKHMQNCLEKIKILEH
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atggttgcatttaaaaataggtacatggtaatggaagttttcttggatccaaatcgggac
cttgtgggggatgatcctatcataatcacacaatttaatgtgtcaaaagcaataaaagac
agcattctagtaaactatggagagtgtggtttggcttcatcgcttggatcattacaagta
aaatatgtaaatcccatcacaaagctatgtattatcagagcctcacgagaggattaccag
aaggtttggtctgcaattaccatggttaggagtattggaaattgcccagtgttattcaac
ttactggacctaagtgggagtattaaggcctgcagaagtgctgctttaaagtgtgatgaa
gctaaatttgcacagtacaagcttgtggttggagaccgtctttcagaggatgttactaaa
cacatgcaaaattgtcttgaaaagatcaagattttggagcactga
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