Manihot esculenta (cassava): 110607140
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Entry
110607140 CDS
T05761
Name
(RefSeq) tRNA pseudouridine synthase Pus10 isoform X2
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110607140
Enzymes [BR:
mesc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
110607140
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110607140
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
110607140
NCBI-ProteinID:
XP_021601909
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Position
18:1060387..1068927
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AA seq
606 aa
AA seq
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MRTSSTYAPVPQHSEKKRESAANCLRRENCFQMSSESEAAHFSNTPDANSTAEESHTAVG
GEDMQLVKEAVRSLPSPAVKDLMSIGVCMRCIFRLLGVHGHVYSWSFPSSTEMRAMLGEP
TCPEEHIVVSSLKGGEDKKNSSSYEDLEVEPETCSICLGILQFIYYDAKGLMVKKGTAIS
LALSISEQIKKEGHQLDSFSLEVSIPTVIQENEHIVHLYMKRKYRSELWFEERFSKCIST
KEVLKFAMTNSLEKLLDVKSGPSSCRIRLTYAQTKPSSTVPSSVERGEGCKRRKTGASPV
FDSVNDKLVDASNDCFHLSTTKGNALGESSSNGLEDHESSECIIFPEDKVNDPCHLVFLC
YRTPIYLGGRYLKFSRNVSQTRWMIDDERMGEASVEEIIGGYILPVCHGDSYKFHAAGRE
DIDVRMLGSGRPFLVEIQNARHVPSEALVKEIEININNLNTQLVLVKNLKMVANEGWTLI
HEGEAEKQKQYCALVWISRPLENQDLQSIASLKDLQILQKTPVRVLHRRSPLEREKIIHW
MKIETIAESSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTDVKM
DCFLAE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacttcttccacttatgctcccgttccacagcactccgagaaaaagagggagagt
gccgccaattgccttcgccgggagaattgttttcaaatgtctagcgagagtgaagctgcg
cattttagcaatactccagatgctaactcaactgcagaggaatcccacacggccgttggc
ggcgaggatatgcaactcgtcaaagaagccgttcgttctttgccttctcccgctgtaaag
gacttgatgtccattggggtatgcatgagatgcatctttcggctacttggggtccatgga
catgtttattcttggtcctttccctcatcaacggaaatgcgtgctatgcttggagagcca
acatgtccagaagagcatatagtggtctccagtttgaaaggtggtgaagataagaaaaat
tcttcttcatatgaggatttagaagttgagccagaaacatgcagcatttgtttgggtatc
ttgcagttcatttactatgatgctaaaggattgatggtgaaaaaagggactgctattagc
ttggctctatcaatttctgaacagataaagaaagagggtcatcagcttgatagcttttct
cttgaagtctctataccaacagttatccaggaaaatgaacatattgttcatttgtatatg
aaaaggaagtacagatcagagctatggtttgaagaaagattttctaaatgcatttctaca
aaggaagtcttgaagtttgcaatgacaaattcccttgaaaaattgttggatgtaaaatct
ggtccaagctcttgtcgtatccgtttgacatatgcccaaacgaagccatcaagcacggtt
ccaagttcagtggagagaggtgaaggttgcaagagaagaaaaacaggtgctagtcctgtt
tttgattctgttaacgataaattagtggatgctagcaatgattgttttcatctctctacc
accaaaggaaatgctttaggtgagagttcttctaatggtttggaggaccatgaatcttct
gagtgcatcatcttccctgaggataaggtcaatgatccctgccacttggtatttctttgc
tacaggacacctatctaccttggtggaagatacctgaagttctcaaggaatgtgagtcaa
actcgttggatgattgatgatgaaagaatgggagaagcatctgttgaggagataatagga
gggtacatccttccagtgtgtcatggtgacagttacaagtttcatgctgctggtagagaa
gatatcgatgttcgaatgctgggttcaggtaggcctttcctggttgagatacaaaatgct
cgtcatgtcccatctgaggctcttgtgaaagaaatagagataaatataaataacttaaat
actcaattggttttggttaaaaatcttaaaatggtagccaatgagggctggactctgata
catgaaggagaagcagaaaagcagaagcagtattgtgcactagtgtggatttcacgccca
cttgaaaatcaagacttgcagtcaattgcttccctcaaggacttgcaaattttgcagaaa
accccagtaagggtgcttcaccgtcggagtccattagaacgtgaaaagattatacattgg
atgaaaatagaaacaattgctgagagctctcaatatttccttttgcatctatgtactcag
gctggtacatatatcaaagaatttgttcatggggatctagggcgtacacatccaagcatt
ggatcaattctaggatgcagagcagagatcctgcaacttgatgttactgatgtgaaaatg
gactgtttcctggctgaatga
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